Variant report

Variant	rs10244228
Chromosome Location	chr7:103619355-103619356
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10234631	1.00[EUR][1000 genomes]
rs10248650	0.87[YRI][hapmap];1.00[EUR][1000 genomes]
rs12112464	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs262358	1.00[EUR][1000 genomes]
rs262371	1.00[EUR][1000 genomes]
rs60208000	1.00[EUR][1000 genomes]
rs73405640	1.00[EUR][1000 genomes]
rs73405671	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73405677	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73715928	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv818543	chr7:103616877-103621132	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103609000-103621400	Weak transcription	HepG2	liver
2	chr7:103613800-103627800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr7:103617000-103621000	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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