Variant report

Variant	rs10250238
Chromosome Location	chr7:38375638-38375639
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr7:38375119-38375649	H1-hESC	embryonic stem cell:	n/a	chr7:38375377-38375386 chr7:38375375-38375389 chr7:38375373-38375385 chr7:38375371-38375390
2	RFX5	chr7:38375342-38375675	K562	blood:	n/a	chr7:38375551-38375559
3	IRF1	chr7:38375195-38375688	K562	blood:	n/a	chr7:38375613-38375633
4	HEY1	chr7:38375191-38375669	K562	blood:	n/a	n/a
5	ARID3A	chr7:38375261-38375775	K562	blood:	n/a	n/a
6	TCF12	chr7:38375127-38375770	A549	lung:	n/a	chr7:38375488-38375495 chr7:38375486-38375493 chr7:38375487-38375497
7	ZNF143	chr7:38375118-38375663	GM12878	blood:	n/a	chr7:38375290-38375309
8	CTCF	chr7:38375112-38375744	K562	blood:	n/a	chr7:38375481-38375494 chr7:38375373-38375391 chr7:38375374-38375390 chr7:38375375-38375388 chr7:38375368-38375389
9	JUN	chr7:38374585-38375926	K562	blood:	n/a	chr7:38375245-38375256 chr7:38375246-38375254
10	MAX	chr7:38375032-38375847	K562	blood:	n/a	n/a
11	MAX	chr7:38375146-38375684	MCF-7	breast:	n/a	n/a
12	RAD21	chr7:38374922-38375790	SK-N-SH	brain:	n/a	chr7:38375377-38375386 chr7:38375375-38375389 chr7:38375373-38375385 chr7:38375371-38375390
13	TEAD4	chr7:38375045-38376191	K562	blood:	n/a	n/a
14	BHLHE40	chr7:38374979-38376051	K562	blood:	n/a	n/a
15	RAD21	chr7:38375112-38375648	H1-hESC	embryonic stem cell:	n/a	chr7:38375377-38375386 chr7:38375375-38375389 chr7:38375373-38375385 chr7:38375371-38375390
16	SMC3	chr7:38375145-38375671	K562	blood:	n/a	chr7:38375375-38375389
17	ZNF143	chr7:38375114-38375668	H1-hESC	embryonic stem cell:	n/a	chr7:38375290-38375309
18	POLR2A	chr7:38374757-38375759	U87	brain:	n/a	n/a
19	POLR2A	chr7:38375052-38375767	K562	blood:	n/a	n/a
20	TBL1XR1	chr7:38375178-38375898	K562	blood:	n/a	n/a
21	HDAC2	chr7:38375146-38375639	K562	blood:	n/a	n/a
22	HDAC2	chr7:38375277-38375643	K562	blood:	n/a	n/a
23	ZNF263	chr7:38375065-38375667	K562	blood:	n/a	n/a
24	PML	chr7:38375246-38375815	K562	blood:	n/a	n/a
25	CBX3	chr7:38375046-38375715	K562	blood:	n/a	n/a
26	BCLAF1	chr7:38375138-38375654	GM12878	blood:	n/a	chr7:38375198-38375207
27	POLR2A	chr7:38374724-38375788	HL-60	blood:	n/a	n/a
28	MAFK	chr7:38375240-38376059	K562	blood:	n/a	n/a
29	POLR2A	chr7:38375111-38375756	K562	blood:	n/a	n/a
30	EP300	chr7:38375238-38375665	K562	blood:	n/a	n/a
31	CHD2	chr7:38375140-38375775	GM12878	blood:	n/a	n/a
32	POLR2A	chr7:38375099-38375677	K562	blood:	n/a	n/a
33	E2F6	chr7:38375207-38376125	K562	blood:	n/a	n/a
34	SPI1	chr7:38374726-38375649	GM12878	blood:	n/a	chr7:38375195-38375208 chr7:38374978-38374987 chr7:38375197-38375206 chr7:38375118-38375125 chr7:38375505-38375518
35	POLR2A	chr7:38374857-38375759	U87	brain:	n/a	n/a
36	CUX1	chr7:38375036-38375725	K562	blood:	n/a	n/a
37	UBTF	chr7:38375163-38375840	K562	blood:	n/a	n/a
38	CTCF	chr7:38375030-38375684	H1-hESC	embryonic stem cell:	n/a	chr7:38375481-38375494 chr7:38375373-38375391 chr7:38375374-38375390 chr7:38375375-38375388 chr7:38375368-38375389
39	YY1	chr7:38375160-38375642	K562	blood:	n/a	chr7:38375374-38375396 chr7:38375377-38375385 chr7:38375373-38375385
40	POLR2A	chr7:38375108-38375791	K562	blood:	n/a	n/a
41	RAD21	chr7:38375171-38375676	MCF-7	breast:	n/a	chr7:38375377-38375386 chr7:38375375-38375389 chr7:38375373-38375385 chr7:38375371-38375390
42	ZMIZ1	chr7:38375264-38375756	K562	blood:	n/a	n/a
43	HCFC1	chr7:38375047-38375824	K562	blood:	n/a	n/a
44	CEBPB	chr7:38375302-38375655	K562	blood:	n/a	n/a
45	JUN	chr7:38375258-38376025	K562	blood:	n/a	n/a
46	RAD21	chr7:38375105-38375692	A549	lung:	n/a	chr7:38375377-38375386 chr7:38375375-38375389 chr7:38375373-38375385 chr7:38375371-38375390
47	ZNF263	chr7:38374753-38375766	HEK293-T-REx	kidney:	n/a	n/a
48	CTCF	chr7:38375083-38375680	A549	lung:	n/a	chr7:38375481-38375494 chr7:38375373-38375391 chr7:38375374-38375390 chr7:38375375-38375388 chr7:38375368-38375389
49	CTCF	chr7:38375122-38375752	K562	blood:	n/a	chr7:38375481-38375494 chr7:38375373-38375391 chr7:38375374-38375390 chr7:38375375-38375388 chr7:38375368-38375389
50	MAX	chr7:38375150-38375762	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:38372590..38377698-chr7:38377994..38383669,12	K562	blood:
2	chr7:38375070..38375771-chr7:38393808..38394547,2	MCF-7	breast:
3	chr7:38255022..38255645-chr7:38375302..38376120,3	MCF-7	breast:
4	chr7:38375472..38376033-chr7:38384935..38385704,2	MCF-7	breast:
5	chr7:38350491..38352001-chr7:38373860..38376555,2	K562	blood:
6	chr7:38369664..38372472-chr7:38373590..38376789,3	K562	blood:

Variant related genes	Relation type
TRGV7	TF binding region
ENSG00000226212	Chromatin interaction
ENSG00000231916	Chromatin interaction
ENSG00000211698	Chromatin interaction
ENSG00000211696	Chromatin interaction
ENSG00000228668	Chromatin interaction

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10232528	0.91[AMR][1000 genomes]
rs10249867	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:59 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758112	chr7:38218703-38523455	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
2	esv2759524	chr7:38218703-38523455	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
3	nsv427776	chr7:38218703-38523455	Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
4	nsv830964	chr7:38218708-38390518	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
5	nsv1025974	chr7:38227528-38503472	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
6	nsv538819	chr7:38227528-38503472	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
7	nsv932229	chr7:38248340-38727527	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
8	nsv1027803	chr7:38257707-38410660	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
9	nsv538820	chr7:38257707-38410660	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
10	nsv1020990	chr7:38257707-38503472	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
11	nsv870213	chr7:38261012-38382508	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
12	nsv433054	chr7:38268395-38403367	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
13	nsv433049	chr7:38268395-38404971	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
14	esv1793647	chr7:38269292-38383243	Active TSS Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
15	esv1804547	chr7:38269292-38383243	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
16	esv1822202	chr7:38269292-38383243	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
17	esv1827702	chr7:38269292-38383243	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
18	esv1838074	chr7:38269292-38383243	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
19	esv1849699	chr7:38269292-38383243	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
20	esv2755783	chr7:38271544-38404971	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
21	esv1000823	chr7:38271623-38390120	Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
22	esv33146	chr7:38288048-38406196	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
23	nsv820039	chr7:38289515-38411222	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
24	nsv824070	chr7:38290446-38378882	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
25	nsv824073	chr7:38293736-38380752	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
26	nsv824074	chr7:38293736-38404608	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
27	esv2757222	chr7:38294079-38418165	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
28	nsv1016366	chr7:38294089-38387431	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
29	nsv1016455	chr7:38294089-38402496	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
30	nsv433104	chr7:38294114-38384841	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
31	nsv433096	chr7:38294114-38386791	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
32	esv34699	chr7:38311060-38386791	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
33	nsv429726	chr7:38311098-38384841	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
34	nsv429718	chr7:38311098-38404971	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
35	nsv870301	chr7:38315298-38376501	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
36	nsv1019694	chr7:38317558-38387431	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
37	nsv818497	chr7:38318590-38380446	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
38	nsv519863	chr7:38318590-38417556	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
39	nsv1016931	chr7:38319339-38398047	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
40	nsv1019941	chr7:38319437-38472680	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
41	nsv1031936	chr7:38319437-38503472	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
42	nsv464433	chr7:38321653-38380446	Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
43	nsv606651	chr7:38321653-38380446	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
44	nsv429745	chr7:38323485-38470561	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
45	nsv1017035	chr7:38325441-38387431	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
46	nsv1035105	chr7:38328273-38387431	Flanking Active TSS Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
47	nsv1030938	chr7:38330837-38392024	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
48	nsv830965	chr7:38350614-38521047	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
49	nsv1022530	chr7:38356595-38384841	Bivalent Enhancer Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
50	nsv1022088	chr7:38356595-38387431	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38371800-38380600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr7:38373800-38376000	Flanking Active TSS	Dnd41	blood
3	chr7:38374200-38377000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr7:38374200-38377600	Enhancers	Placenta	Placenta
5	chr7:38374400-38376000	Enhancers	Fetal Muscle Leg	muscle
6	chr7:38374600-38375800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
7	chr7:38374600-38376400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr7:38374600-38376600	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr7:38374800-38375800	Enhancers	NHLF	lung
10	chr7:38374800-38376000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
11	chr7:38374800-38376000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr7:38374800-38376400	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr7:38374800-38376600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
14	chr7:38375000-38375800	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr7:38375000-38375800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
16	chr7:38375000-38375800	Active TSS	Rectal Smooth Muscle	rectum
17	chr7:38375000-38375800	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr7:38375000-38376600	Enhancers	Primary B cells from peripheral blood	blood
19	chr7:38375200-38375800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr7:38375200-38375800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr7:38375200-38375800	Flanking Active TSS	Primary B cells from cord blood	blood
22	chr7:38375200-38375800	Flanking Active TSS	Adipose Nuclei	Adipose
23	chr7:38375200-38375800	Enhancers	A549	lung
24	chr7:38375200-38376000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
25	chr7:38375200-38376000	Enhancers	Thymus	Thymus
26	chr7:38375200-38376200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
27	chr7:38375200-38376400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
28	chr7:38375200-38376600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
29	chr7:38375200-38376800	Enhancers	Pancreas	Pancrea
30	chr7:38375200-38377000	Enhancers	Primary T cells from cord blood	blood
31	chr7:38375400-38375800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr7:38375400-38375800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr7:38375400-38375800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr7:38375400-38375800	Flanking Active TSS	Primary hematopoietic stem cells	blood
35	chr7:38375400-38375800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
36	chr7:38375400-38375800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
37	chr7:38375400-38375800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr7:38375400-38375800	Flanking Active TSS	Brain Hippocampus Middle	brain
39	chr7:38375400-38375800	Enhancers	Colonic Mucosa	Colon
40	chr7:38375400-38375800	Enhancers	Duodenum Smooth Muscle	Duodenum
41	chr7:38375400-38375800	Flanking Active TSS	Fetal Intestine Large	intestine
42	chr7:38375400-38375800	Enhancers	Fetal Muscle Trunk	muscle
43	chr7:38375400-38375800	Enhancers	Gastric	stomach
44	chr7:38375400-38375800	Enhancers	Lung	lung
45	chr7:38375400-38375800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
46	chr7:38375400-38375800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
47	chr7:38375400-38375800	Enhancers	Sigmoid Colon	Sigmoid Colon
48	chr7:38375400-38375800	Enhancers	Stomach Mucosa	stomach
49	chr7:38375400-38375800	Flanking Active TSS	GM12878-XiMat	blood
50	chr7:38375400-38376000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood

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