The 2.0 version of rSNPBase
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Variant report
Variant
rs10251069
Chromosome Location
chr7:117059908-117059909
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:4)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:4 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
7:115890993-115892266..7:117057168-117062301
H1-hESC
embryonic stem cell:
embryo
2
chr7:117059565..117061568-chr7:117064558..117067461,3
K562
blood:
3
chr7:117059699..117061785-chr7:117074427..117076439,2
K562
blood:
4
chr7:117058253..117061199-chr7:117072974..117075927,2
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000135269
Chromatin interaction
Extended variants information (count: 4 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:4)
rs_ID
r
2
[population]
rs10237738
0.83[YRI][hapmap]
rs10246528
0.80[AFR][1000 genomes]
rs10487367
0.83[YRI][hapmap]
rs213945
1.00[ASW][hapmap]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links