Variant report

Variant	rs10262855
Chromosome Location	chr7:141255273-141255274
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:141249647..141254181-chr7:141255212..141259183,7	MCF-7	breast:
2	chr7:141249491..141254462-chr7:141254537..141260980,17	K562	blood:

Variant related genes	Relation type
ENSG00000261570	Chromatin interaction
ENSG00000006530	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34135	chr7:141047454-141492898	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
2	nsv1034207	chr7:141236933-141290500	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:141251800-141255600	Weak transcription	Lung	lung
2	chr7:141251800-141261400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr7:141251800-141261600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr7:141251800-141261600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr7:141251800-141261600	Weak transcription	Pancreas	Pancrea
6	chr7:141251800-141262400	Weak transcription	Esophagus	oesophagus
7	chr7:141251800-141267200	Weak transcription	Placenta	Placenta
8	chr7:141251800-141267800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:141251800-141284600	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr7:141252000-141255400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:141252000-141255400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr7:141252000-141255400	Weak transcription	Fetal Intestine Large	intestine
13	chr7:141252000-141255600	Weak transcription	Left Ventricle	heart
14	chr7:141252000-141255600	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr7:141252000-141255800	Weak transcription	Fetal Intestine Small	intestine
16	chr7:141252000-141255800	Weak transcription	Ovary	ovary
17	chr7:141252000-141256000	Weak transcription	Fetal Muscle Trunk	muscle
18	chr7:141252000-141257000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr7:141252000-141257000	Weak transcription	HSMMtube	muscle
20	chr7:141252000-141261400	Weak transcription	Right Ventricle	heart
21	chr7:141252000-141261400	Weak transcription	Thymus	Thymus
22	chr7:141252000-141261600	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr7:141252000-141261800	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr7:141252000-141261800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr7:141252000-141264000	Weak transcription	Fetal Kidney	kidney
26	chr7:141252000-141264600	Weak transcription	Colonic Mucosa	Colon
27	chr7:141252000-141266600	Weak transcription	H1 Cell Line	embryonic stem cell
28	chr7:141252000-141352600	Weak transcription	Gastric	stomach
29	chr7:141252200-141255800	Weak transcription	Fetal Brain Female	brain
30	chr7:141252200-141256000	Weak transcription	Rectal Mucosa Donor 29	rectum
31	chr7:141252200-141256400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr7:141252200-141257400	Weak transcription	Fetal Lung	lung
33	chr7:141252200-141258200	Weak transcription	NH-A	brain
34	chr7:141252200-141258600	Weak transcription	Primary B cells from cord blood	blood
35	chr7:141252200-141258600	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr7:141252200-141258800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
37	chr7:141252200-141261600	Weak transcription	Brain Angular Gyrus	brain
38	chr7:141252200-141265200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr7:141252200-141267800	Weak transcription	Right Atrium	heart
40	chr7:141252200-141274000	Weak transcription	Hela-S3	cervix
41	chr7:141252200-141274400	Weak transcription	Stomach Mucosa	stomach
42	chr7:141252200-141285600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr7:141252200-141362400	Weak transcription	Small Intestine	intestine
44	chr7:141252400-141255400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr7:141252400-141255600	Weak transcription	Duodenum Mucosa	Duodenum
46	chr7:141252400-141255800	Weak transcription	Brain Anterior Caudate	brain
47	chr7:141252400-141256400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr7:141252400-141256800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr7:141252400-141257200	Weak transcription	Brain Substantia Nigra	brain
50	chr7:141252400-141257400	Weak transcription	Muscle Satellite Cultured Cells	--

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