Variant report

Variant	rs10305867
Chromosome Location	chr4:148407049-148407050
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:148400285..148404582-chr4:148404756..148408817,4	K562	blood:

Variant related genes	Relation type
ENSG00000151617	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs12508763	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830109	chr4:148295061-148468605	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
2	nsv1028958	chr4:148377752-148793485	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148403800-148417600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:148404200-148407600	Weak transcription	NHEK	skin
3	chr4:148404200-148408000	Weak transcription	Aorta	Aorta
4	chr4:148404200-148408000	Weak transcription	Gastric	stomach
5	chr4:148404200-148412000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr4:148404200-148413000	Weak transcription	Osteobl	bone
7	chr4:148404200-148413200	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr4:148404200-148418800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr4:148404200-148419000	Weak transcription	HMEC	breast
10	chr4:148404400-148407400	Weak transcription	Right Ventricle	heart
11	chr4:148404400-148407600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr4:148404400-148408200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr4:148404400-148408200	Weak transcription	NHDF-Ad	bronchial
14	chr4:148404400-148409400	Weak transcription	NH-A	brain
15	chr4:148404600-148412000	Weak transcription	Fetal Kidney	kidney
16	chr4:148404600-148413000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr4:148404600-148413000	Weak transcription	Stomach Smooth Muscle	stomach
18	chr4:148404600-148413200	Weak transcription	Fetal Muscle Leg	muscle
19	chr4:148404600-148419000	Weak transcription	NHLF	lung
20	chr4:148405600-148408200	Genic enhancers	Fetal Lung	lung
21	chr4:148405800-148416000	Weak transcription	Spleen	Spleen
22	chr4:148406400-148408400	Genic enhancers	Ovary	ovary
23	chr4:148406600-148408200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr4:148406600-148410600	Enhancers	Fetal Heart	heart
25	chr4:148406800-148407200	Enhancers	Fetal Intestine Small	intestine
26	chr4:148406800-148407200	Enhancers	Left Ventricle	heart
27	chr4:148406800-148407400	Strong transcription	Fetal Muscle Trunk	muscle
28	chr4:148406800-148408200	Strong transcription	Fetal Stomach	stomach
29	chr4:148407000-148407400	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr4:148407000-148408000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr4:148407000-148413200	Weak transcription	Right Atrium	heart

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