Variant report

Variant rs1030952
Chromosome Location chr5:124487483-124487484
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124477200-124488200 Weak transcription HUVEC blood vessel
2 chr5:124484000-124490800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr5:124485000-124490000 Enhancers Fetal Lung lung
4 chr5:124485200-124487800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr5:124485200-124488800 Enhancers Brain Substantia Nigra brain
6 chr5:124485200-124490000 Weak transcription HSMM muscle
7 chr5:124485400-124487600 Enhancers Brain Cingulate Gyrus brain
8 chr5:124485400-124488200 Weak transcription H9 Cell Line embryonic stem cell
9 chr5:124485400-124489600 Enhancers Fetal Kidney kidney
10 chr5:124485600-124489800 Weak transcription Fetal Muscle Leg muscle
11 chr5:124486000-124488200 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr5:124486000-124489200 Weak transcription HSMMtube muscle
13 chr5:124486000-124489600 Weak transcription NHDF-Ad bronchial
14 chr5:124486000-124489800 Enhancers iPS-15b Cell Line embryonic stem cell
15 chr5:124486000-124490600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:124486200-124488200 Enhancers HUES64 Cell Line embryonic stem cell
17 chr5:124486400-124487800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr5:124486400-124490000 Weak transcription Fetal Stomach stomach
19 chr5:124486600-124488600 Enhancers HUES6 Cell Line embryonic stem cell
20 chr5:124486600-124490600 Enhancers Adipose Nuclei Adipose
21 chr5:124486800-124488000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:124486800-124488000 Enhancers Cortex derived primary cultured neurospheres brain
23 chr5:124486800-124488200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:124486800-124488400 Enhancers Brain Inferior Temporal Lobe brain
25 chr5:124486800-124489200 Enhancers Brain Angular Gyrus brain
26 chr5:124486800-124490000 Enhancers ES-I3 Cell Line embryonic stem cell
27 chr5:124486800-124490000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr5:124486800-124491000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr5:124487000-124487600 Weak transcription H1 Cell Line embryonic stem cell
30 chr5:124487000-124487600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr5:124487000-124487800 Enhancers Brain Germinal Matrix brain
32 chr5:124487000-124488400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr5:124487000-124488800 Enhancers Brain Hippocampus Middle brain
34 chr5:124487000-124489000 Enhancers Brain Anterior Caudate brain
35 chr5:124487200-124487600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
36 chr5:124487200-124487800 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr5:124487200-124487800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
38 chr5:124487400-124487800 Enhancers GM12878-XiMat blood
39 chr5:124487400-124488400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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