Variant report

Variant rs1035540
Chromosome Location chr16:75278795-75278796
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75266600-75278800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr16:75269600-75280600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
3 chr16:75270400-75278800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
4 chr16:75272800-75278800 Genic enhancers Gastric stomach
5 chr16:75276600-75279200 Weak transcription Fetal Brain Female brain
6 chr16:75276600-75279400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr16:75276800-75283400 Enhancers NHDF-Ad bronchial
8 chr16:75276800-75283800 Enhancers Left Ventricle heart
9 chr16:75277000-75279000 Enhancers Brain Inferior Temporal Lobe brain
10 chr16:75277000-75279200 Enhancers Aorta Aorta
11 chr16:75277000-75280200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
12 chr16:75277000-75280200 Enhancers Brain Substantia Nigra brain
13 chr16:75277000-75281400 Enhancers Brain Angular Gyrus brain
14 chr16:75277000-75283400 Genic enhancers Fetal Intestine Small intestine
15 chr16:75277200-75279000 Enhancers Right Ventricle heart
16 chr16:75277200-75279200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr16:75277200-75279200 Enhancers Brain Anterior Caudate brain
18 chr16:75277200-75281600 Genic enhancers Fetal Stomach stomach
19 chr16:75277200-75284200 Enhancers Spleen Spleen
20 chr16:75277400-75281800 Enhancers Adipose Nuclei Adipose
21 chr16:75277400-75281800 Enhancers Stomach Mucosa stomach
22 chr16:75277400-75283400 Enhancers Colon Smooth Muscle Colon
23 chr16:75277600-75278800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
24 chr16:75277600-75278800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
25 chr16:75277600-75278800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
26 chr16:75277600-75279000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr16:75277600-75279000 Enhancers HMEC breast
28 chr16:75277600-75279200 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr16:75277600-75279200 Genic enhancers Colonic Mucosa Colon
30 chr16:75277600-75279600 Enhancers Duodenum Mucosa Duodenum
31 chr16:75277600-75280000 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr16:75277600-75281200 Enhancers Esophagus oesophagus
33 chr16:75277600-75281400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr16:75277600-75281600 Flanking Active TSS Stomach Smooth Muscle stomach
35 chr16:75277600-75283200 Enhancers Psoas Muscle Psoas
36 chr16:75277600-75283600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr16:75277600-75283800 Enhancers H1 Cell Line embryonic stem cell
38 chr16:75277600-75283800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr16:75277600-75283800 Enhancers Ovary ovary
40 chr16:75277600-75284000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
41 chr16:75277600-75284000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
42 chr16:75277600-75284000 Enhancers Right Atrium heart
43 chr16:75277600-75284400 Enhancers Fetal Lung lung
44 chr16:75277800-75278800 Genic enhancers Rectal Mucosa Donor 29 rectum
45 chr16:75277800-75279400 Flanking Active TSS Brain Hippocampus Middle brain
46 chr16:75277800-75279800 Enhancers Brain Germinal Matrix brain
47 chr16:75277800-75279800 Enhancers Fetal Thymus thymus
48 chr16:75277800-75280800 Enhancers Lung lung
49 chr16:75277800-75281800 Enhancers HSMMtube muscle
50 chr16:75277800-75282800 Enhancers Rectal Mucosa Donor 31 rectum

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