Variant report

Variant rs10406489
Chromosome Location chr19:36747853-36747854
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36730400-36748400 Weak transcription HSMMtube muscle
2 chr19:36737400-36748000 Weak transcription Ovary ovary
3 chr19:36739600-36756800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr19:36744800-36748000 ZNF genes & repeats Fetal Brain Female brain
5 chr19:36745400-36748000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
6 chr19:36745400-36749200 ZNF genes & repeats Pancreas Pancrea
7 chr19:36745800-36750600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
8 chr19:36746200-36748200 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
9 chr19:36746200-36748800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
10 chr19:36746200-36749400 ZNF genes & repeats Fetal Stomach stomach
11 chr19:36746400-36748800 ZNF genes & repeats Spleen Spleen
12 chr19:36746800-36748000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr19:36746800-36748000 Weak transcription Stomach Smooth Muscle stomach
14 chr19:36747000-36750000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
15 chr19:36747400-36748000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:36747600-36749200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:36747600-36749200 Enhancers Fetal Brain Male brain
18 chr19:36747600-36749400 ZNF genes & repeats Lung lung
19 chr19:36747800-36748000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
20 chr19:36747800-36748000 Active TSS Adipose Nuclei Adipose
21 chr19:36747800-36748000 Flanking Active TSS Brain Anterior Caudate brain
22 chr19:36747800-36748000 Flanking Active TSS Brain Cingulate Gyrus brain
23 chr19:36747800-36748000 Flanking Active TSS Brain Hippocampus Middle brain
24 chr19:36747800-36748000 Enhancers Fetal Muscle Leg muscle
25 chr19:36747800-36748000 Enhancers Right Ventricle heart
26 chr19:36747800-36748200 ZNF genes & repeats Brain Germinal Matrix brain
27 chr19:36747800-36748200 Enhancers Duodenum Smooth Muscle Duodenum
28 chr19:36747800-36748200 Flanking Active TSS Fetal Muscle Trunk muscle
29 chr19:36747800-36748600 ZNF genes & repeats Colonic Mucosa Colon
30 chr19:36747800-36748800 Active TSS HUES64 Cell Line embryonic stem cell
31 chr19:36747800-36748800 Active TSS Brain Angular Gyrus brain
32 chr19:36747800-36749000 Active TSS Breast Myoepithelial Primary Cells Breast
33 chr19:36747800-36749000 Active TSS Brain Substantia Nigra brain
34 chr19:36747800-36749200 Active TSS H9 Cell Line embryonic stem cell
35 chr19:36747800-36749200 Active TSS HUES48 Cell Line embryonic stem cell
36 chr19:36747800-36749200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr19:36747800-36749400 Active TSS HUES6 Cell Line embryonic stem cell
38 chr19:36747800-36749400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
39 chr19:36747800-36749400 Active TSS Brain Inferior Temporal Lobe brain
40 chr19:36747800-36749600 ZNF genes & repeats H1 Cell Line embryonic stem cell
41 chr19:36747800-36749600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr19:36747800-36749600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
43 chr19:36747800-36749800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr19:36747800-36749800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin

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