The 2.0 version of rSNPBase

Variant report

Variant rs10408549
Chromosome Location chr19:41892110-41892111
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41880400-41894000 Weak transcription HSMMtube muscle
2 chr19:41882800-41895400 Weak transcription Psoas Muscle Psoas
3 chr19:41882800-41895600 Weak transcription HSMM muscle
4 chr19:41883000-41892600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr19:41883000-41895400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr19:41883000-41895600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr19:41883000-41895600 Weak transcription Aorta Aorta
8 chr19:41883000-41896000 Weak transcription Small Intestine intestine
9 chr19:41883000-41896000 Weak transcription HUVEC blood vessel
10 chr19:41883000-41902800 Weak transcription Stomach Mucosa stomach
11 chr19:41883200-41892200 Weak transcription Duodenum Mucosa Duodenum
12 chr19:41883200-41892600 Weak transcription NHLF lung
13 chr19:41883200-41892800 Weak transcription Brain Substantia Nigra brain
14 chr19:41883200-41892800 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr19:41883200-41893200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr19:41883200-41893800 Weak transcription Esophagus oesophagus
17 chr19:41883200-41894000 Weak transcription H9 Cell Line embryonic stem cell
18 chr19:41883200-41894200 Weak transcription Rectal Smooth Muscle rectum
19 chr19:41883200-41895400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr19:41883200-41895400 Weak transcription Right Ventricle heart
21 chr19:41883200-41895600 Weak transcription Muscle Satellite Cultured Cells --
22 chr19:41883200-41896200 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr19:41883200-41896200 Weak transcription Colonic Mucosa Colon
24 chr19:41883200-41896200 Weak transcription Fetal Kidney kidney
25 chr19:41883200-41897200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr19:41883200-41901400 Weak transcription Fetal Brain Male brain
27 chr19:41883200-41902600 Weak transcription Right Atrium heart
28 chr19:41883200-41902800 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr19:41883200-41902800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:41883400-41894600 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr19:41883400-41896200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr19:41883400-41896200 Weak transcription Osteobl bone
33 chr19:41884400-41892800 Weak transcription K562 blood
34 chr19:41884400-41893000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr19:41884400-41893800 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr19:41884400-41894000 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr19:41884400-41894200 Weak transcription Colon Smooth Muscle Colon
38 chr19:41884600-41892600 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr19:41884600-41892800 Weak transcription H1 Cell Line embryonic stem cell
40 chr19:41884600-41893200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr19:41884600-41894600 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr19:41884600-41896200 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr19:41884600-41902400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr19:41884800-41892600 Weak transcription Fetal Thymus thymus
45 chr19:41884800-41893000 Weak transcription HepG2 liver
46 chr19:41885200-41892800 Weak transcription Primary hematopoietic stem cells blood
47 chr19:41886200-41896600 Weak transcription Hela-S3 cervix
48 chr19:41886400-41892200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr19:41886400-41892400 Weak transcription Primary B cells from cord blood blood
50 chr19:41886400-41902800 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015