Variant report

Variant rs10408694
Chromosome Location chr19:39075392-39075393
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38985200-39081800 Weak transcription Psoas Muscle Psoas
2 chr19:39036000-39076400 Weak transcription Brain Substantia Nigra brain
3 chr19:39053200-39077800 Weak transcription Brain Hippocampus Middle brain
4 chr19:39053200-39086800 Weak transcription Brain Angular Gyrus brain
5 chr19:39053200-39086800 Weak transcription Brain Inferior Temporal Lobe brain
6 chr19:39053400-39075400 Weak transcription Brain Anterior Caudate brain
7 chr19:39056400-39086400 Weak transcription Brain Cingulate Gyrus brain
8 chr19:39056800-39075400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr19:39056800-39077800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr19:39057200-39085200 Strong transcription Fetal Muscle Leg muscle
11 chr19:39057400-39076800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr19:39057800-39076600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr19:39058400-39081800 Weak transcription Adipose Nuclei Adipose
14 chr19:39061800-39079000 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr19:39064000-39076600 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr19:39064200-39086400 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr19:39067000-39075600 Weak transcription H1 Cell Line embryonic stem cell
18 chr19:39067000-39086600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr19:39068200-39079400 Strong transcription Fetal Muscle Trunk muscle
20 chr19:39069200-39079800 Strong transcription Skeletal Muscle Male skeletal muscle
21 chr19:39069800-39081800 Strong transcription Skeletal Muscle Female skeletal muscle
22 chr19:39070400-39078000 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr19:39070600-39076600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr19:39070600-39078000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr19:39070600-39078000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr19:39070600-39078000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr19:39070600-39082600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr19:39070600-39083800 Weak transcription Placenta Placenta
29 chr19:39070600-39086200 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr19:39070600-39100000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr19:39070800-39078400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr19:39071200-39075400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr19:39071200-39076600 Weak transcription Esophagus oesophagus
34 chr19:39071200-39086000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr19:39072200-39082000 Strong transcription HSMMtube muscle
36 chr19:39072600-39075800 Enhancers Primary monocytes fromperipheralblood blood
37 chr19:39073600-39076600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr19:39074400-39078800 Strong transcription H9 Cell Line embryonic stem cell
39 chr19:39074600-39078000 Weak transcription Primary B cells from cord blood blood
40 chr19:39074600-39078000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr19:39074600-39078200 Weak transcription Fetal Thymus thymus
42 chr19:39074600-39082600 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr19:39074800-39075600 Enhancers Monocytes-CD14+_RO01746 blood
44 chr19:39074800-39075800 Enhancers GM12878-XiMat blood
45 chr19:39074800-39076600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr19:39074800-39076600 Weak transcription Fetal Stomach stomach
47 chr19:39074800-39077200 Weak transcription Primary T cells fromperipheralblood blood
48 chr19:39074800-39077800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr19:39074800-39078200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr19:39074800-39078200 Weak transcription Spleen Spleen

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