Variant report
| Variant | rs10416628 |
|---|---|
| Chromosome Location | chr19:45285734-45285735 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:45281400-45287400 | Weak transcription | Lung | lung |
| 2 | chr19:45281400-45311400 | Weak transcription | Right Atrium | heart |
| 3 | chr19:45281600-45287000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 4 | chr19:45281600-45287400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 5 | chr19:45281600-45287400 | Weak transcription | Gastric | stomach |
| 6 | chr19:45281600-45287600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 7 | chr19:45281600-45288600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 8 | chr19:45281600-45288600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 9 | chr19:45281600-45289200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr19:45281600-45289200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr19:45281600-45292000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 12 | chr19:45281600-45295600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 13 | chr19:45284000-45286200 | Strong transcription | Fetal Stomach | stomach |
| 14 | chr19:45284200-45285800 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 15 | chr19:45284600-45287200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 16 | chr19:45284600-45287400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr19:45284600-45287400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr19:45284600-45287400 | Weak transcription | Stomach Mucosa | stomach |
| 19 | chr19:45284600-45287800 | Weak transcription | Colonic Mucosa | Colon |
| 20 | chr19:45284600-45289000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 21 | chr19:45284600-45289200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 22 | chr19:45284600-45295600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 23 | chr19:45284600-45309800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 24 | chr19:45284800-45287200 | Weak transcription | Liver | Liver |
| 25 | chr19:45284800-45287400 | Weak transcription | Pancreas | Pancrea |
| 26 | chr19:45284800-45287600 | Weak transcription | Spleen | Spleen |
| 27 | chr19:45284800-45299600 | Strong transcription | Fetal Intestine Small | intestine |
| 28 | chr19:45284800-45303400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr19:45284800-45311400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 30 | chr19:45285200-45286000 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 31 | chr19:45285200-45287400 | Strong transcription | Fetal Intestine Large | intestine |
| 32 | chr19:45285200-45299600 | Strong transcription | Duodenum Mucosa | Duodenum |
| 33 | chr19:45285200-45304000 | Strong transcription | NHEK | skin |
| 34 | chr19:45285400-45288000 | Strong transcription | HMEC | breast |
| 35 | chr19:45285600-45285800 | Genic enhancers | Esophagus | oesophagus |
| 36 | chr19:45285600-45285800 | Enhancers | Fetal Muscle Trunk | muscle |
| 37 | chr19:45285600-45286000 | Bivalent/Poised TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 38 | chr19:45285600-45286000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 39 | chr19:45285600-45286200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 40 | chr19:45285600-45286200 | Enhancers | A549 | lung |
| 41 | chr19:45285600-45286200 | Enhancers | HepG2 | liver |
