Variant report

Variant rs10417139
Chromosome Location chr19:41306810-41306811
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41305400-41307000 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:41305800-41307600 Flanking Active TSS HUVEC blood vessel
3 chr19:41305800-41309000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr19:41305800-41316200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
5 chr19:41306000-41307000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
6 chr19:41306000-41307000 Flanking Active TSS Brain Substantia Nigra brain
7 chr19:41306000-41307200 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
8 chr19:41306000-41307400 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr19:41306000-41307400 Flanking Active TSS Brain Angular Gyrus brain
10 chr19:41306000-41307400 Flanking Active TSS NH-A brain
11 chr19:41306000-41308400 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
12 chr19:41306000-41308800 Transcr. at gene 5' and 3' A549 lung
13 chr19:41306000-41309000 Transcr. at gene 5' and 3' Placenta Placenta
14 chr19:41306000-41309200 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
15 chr19:41306000-41309200 Transcr. at gene 5' and 3' Fetal Stomach stomach
16 chr19:41306000-41310400 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
17 chr19:41306000-41311800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
18 chr19:41306200-41307000 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr19:41306200-41307200 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
20 chr19:41306200-41307400 Enhancers Fetal Brain Male brain
21 chr19:41306200-41307400 Flanking Active TSS Ovary ovary
22 chr19:41306200-41307400 Transcr. at gene 5' and 3' Pancreas Pancrea
23 chr19:41306200-41307400 Transcr. at gene 5' and 3' Spleen Spleen
24 chr19:41306200-41307400 Flanking Active TSS HepG2 liver
25 chr19:41306200-41307800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr19:41306200-41308200 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:41306200-41308400 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr19:41306200-41308600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
29 chr19:41306200-41308800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
30 chr19:41306200-41308800 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
31 chr19:41306200-41309000 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:41306200-41309200 Transcr. at gene 5' and 3' NHLF lung
33 chr19:41306200-41309400 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
34 chr19:41306200-41309600 Transcr. at gene 5' and 3' Fetal Adrenal Gland Adrenal Gland
35 chr19:41306200-41309800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
36 chr19:41306200-41309800 Transcr. at gene 5' and 3' Dnd41 blood
37 chr19:41306200-41310200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr19:41306200-41311200 Transcr. at gene 5' and 3' Brain Germinal Matrix brain
39 chr19:41306200-41313200 Enhancers Fetal Heart heart
40 chr19:41306400-41307000 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr19:41306400-41307000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr19:41306400-41307000 Transcr. at gene 5' and 3' ES-UCSF4 Cell Line embryonic stem cell
43 chr19:41306400-41307000 Flanking Active TSS Primary T cells from cord blood blood
44 chr19:41306400-41307000 Transcr. at gene 5' and 3' Esophagus oesophagus
45 chr19:41306400-41307000 Transcr. at gene 5' and 3' Sigmoid Colon Sigmoid Colon
46 chr19:41306400-41307000 Genic enhancers K562 blood
47 chr19:41306400-41307200 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
48 chr19:41306400-41307200 Transcr. at gene 5' and 3' Colon Smooth Muscle Colon
49 chr19:41306400-41307200 Transcr. at gene 5' and 3' Lung lung
50 chr19:41306400-41307200 Transcr. at gene 5' and 3' Thymus Thymus

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