Variant report

Variant	rs10440859
Chromosome Location	chr6:101993089-101993090
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10214490	1.00[YRI][hapmap]
rs9498607	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv538392	chr6:101938381-102148360	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:101986600-101993200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:101991400-101993200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr6:101991600-102001600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:101991800-101993200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:101991800-101993200	Enhancers	HMEC	breast
6	chr6:101992200-101993200	Enhancers	NHEK	skin
7	chr6:101992200-101994000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr6:101992200-101994200	Enhancers	Muscle Satellite Cultured Cells	--
9	chr6:101992600-101993200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:101992600-101994000	Enhancers	Osteobl	bone
11	chr6:101992800-101993200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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