Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:151491359..151493092-chr5:151503050..151505750,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11167571	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12186851	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12187636	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12187670	0.81[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs12188765	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12657138	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12657451	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12657471	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13188666	0.80[AMR][1000 genomes]
rs1551161	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1650910	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs17804712	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs294964	0.82[CHB][hapmap]
rs4403170	0.80[AMR][1000 genomes]
rs4958295	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs534419	0.86[ASN][1000 genomes]
rs9790850	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9790972	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs9791102	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9791157	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020899	chr5:151412785-151516788	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv2760935	chr5:151463117-151586051	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv883039	chr5:151471642-151540888	Enhancers Weak transcription Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv883040	chr5:151471642-151596273	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv5072	chr5:151490271-151530419	Enhancers Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151502600-151505600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:151502600-151506200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr5:151502800-151504600	Enhancers	H1 Cell Line	embryonic stem cell
4	chr5:151502800-151504600	Enhancers	Ovary	ovary
5	chr5:151502800-151504800	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr5:151502800-151505000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr5:151502800-151505000	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr5:151502800-151505600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr5:151503000-151504400	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr5:151503000-151504400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr5:151503200-151504400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr5:151503400-151504400	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr5:151504000-151504600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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