The 2.0 version of rSNPBase

Variant report

Variant rs10465576
Chromosome Location chr1:169367212-169367213
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169338200-169369000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:169341200-169367400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:169349400-169367400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:169350200-169368600 Weak transcription Colonic Mucosa Colon
5 chr1:169352800-169367400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:169353000-169369800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:169354000-169370000 Weak transcription Aorta Aorta
8 chr1:169354800-169370600 Weak transcription Fetal Kidney kidney
9 chr1:169357000-169368200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:169358200-169368000 Weak transcription Esophagus oesophagus
11 chr1:169359200-169368400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:169359600-169369800 Weak transcription NHDF-Ad bronchial
13 chr1:169360600-169372200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:169360800-169367400 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:169360800-169367800 Weak transcription Psoas Muscle Psoas
16 chr1:169360800-169369200 Weak transcription Fetal Intestine Small intestine
17 chr1:169360800-169370600 Weak transcription NHLF lung
18 chr1:169360800-169395200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:169361400-169368000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr1:169361400-169369400 Weak transcription Rectal Smooth Muscle rectum
21 chr1:169362200-169367400 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:169362200-169370000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:169362200-169370000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:169362200-169371200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:169362400-169368000 Weak transcription Brain Hippocampus Middle brain
26 chr1:169362400-169368800 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:169362400-169369800 Weak transcription Fetal Thymus thymus
28 chr1:169362400-169370000 Weak transcription Brain Germinal Matrix brain
29 chr1:169362400-169370000 Weak transcription Fetal Brain Female brain
30 chr1:169362600-169369600 Weak transcription Primary T cells from cord blood blood
31 chr1:169363200-169368200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:169363400-169368800 Weak transcription Primary hematopoietic stem cells blood
33 chr1:169363400-169371200 Weak transcription Ovary ovary
34 chr1:169363600-169367800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:169363600-169368800 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:169363800-169367400 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:169363800-169367800 Weak transcription Fetal Muscle Trunk muscle
38 chr1:169363800-169368600 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:169364000-169369000 Weak transcription Brain Angular Gyrus brain
40 chr1:169364200-169368600 Weak transcription HMEC breast
41 chr1:169364400-169375600 Weak transcription Brain Anterior Caudate brain
42 chr1:169364600-169369000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:169364800-169368200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:169364800-169368600 Weak transcription Brain Cingulate Gyrus brain
45 chr1:169365200-169367400 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr1:169365400-169368200 Weak transcription Duodenum Mucosa Duodenum
47 chr1:169365400-169368800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr1:169365400-169369000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:169365400-169370200 Weak transcription NH-A brain
50 chr1:169365600-169370800 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015