Variant report

Variant rs10489109
Chromosome Location chr4:103596149-103596150
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:103542400-103617400 Weak transcription Rectal Smooth Muscle rectum
2 chr4:103547000-103658200 Weak transcription Small Intestine intestine
3 chr4:103551000-103607600 Strong transcription Primary monocytes fromperipheralblood blood
4 chr4:103551000-103607800 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr4:103553000-103651400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr4:103553400-103608200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr4:103553400-103651400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr4:103556200-103650400 Weak transcription Pancreas Pancrea
9 chr4:103557600-103626400 Weak transcription Lung lung
10 chr4:103559600-103617200 Weak transcription Fetal Stomach stomach
11 chr4:103561000-103614600 Weak transcription Fetal Muscle Leg muscle
12 chr4:103563400-103617600 Weak transcription Brain Cingulate Gyrus brain
13 chr4:103563600-103609400 Weak transcription Brain Hippocampus Middle brain
14 chr4:103570800-103618000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr4:103571200-103605800 Weak transcription NHDF-Ad bronchial
16 chr4:103571400-103605400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr4:103571400-103605400 Weak transcription Brain Substantia Nigra brain
18 chr4:103571600-103606200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:103571800-103596600 Weak transcription Brain Angular Gyrus brain
20 chr4:103571800-103608600 Weak transcription Duodenum Mucosa Duodenum
21 chr4:103571800-103611800 Weak transcription Brain Anterior Caudate brain
22 chr4:103571800-103633600 Weak transcription HepG2 liver
23 chr4:103571800-103655800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr4:103572000-103640800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr4:103572800-103612600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr4:103579400-103615000 Weak transcription Psoas Muscle Psoas
27 chr4:103580000-103644000 Weak transcription Aorta Aorta
28 chr4:103580400-103640600 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr4:103581200-103603800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr4:103581200-103609200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr4:103581200-103627000 Weak transcription Gastric stomach
32 chr4:103581400-103598200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr4:103581800-103681000 Weak transcription Spleen Spleen
34 chr4:103582800-103603400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr4:103584400-103596400 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr4:103584800-103608400 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr4:103585200-103608600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr4:103585200-103609200 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr4:103585600-103613800 Weak transcription Fetal Intestine Large intestine
40 chr4:103586000-103599200 Weak transcription GM12878-XiMat blood
41 chr4:103586000-103607800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr4:103586000-103640600 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr4:103587400-103599200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr4:103587400-103599400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr4:103587400-103605400 Weak transcription Muscle Satellite Cultured Cells --
46 chr4:103587800-103599200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr4:103587800-103599200 Weak transcription HMEC breast
48 chr4:103587800-103603800 Weak transcription HSMM muscle
49 chr4:103588600-103596200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr4:103589000-103618000 Weak transcription Colon Smooth Muscle Colon

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