Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10493500	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1664387	0.98[ASN][1000 genomes]
rs17529262	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17529888	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17529967	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17601288	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1775369	0.98[ASN][1000 genomes]
rs1775370	0.98[ASN][1000 genomes]
rs2244695	0.83[ASN][1000 genomes]
rs3856031	0.82[AFR][1000 genomes]
rs4587520	0.89[ASN][1000 genomes]
rs61771801	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61771830	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72947097	0.82[AFR][1000 genomes]
rs7551627	0.86[EUR][1000 genomes]
rs782224	0.81[ASN][1000 genomes]
rs782230	0.98[ASN][1000 genomes]
rs782231	0.88[ASN][1000 genomes]
rs782233	0.95[ASN][1000 genomes]
rs895279	0.93[ASN][1000 genomes]
rs895281	0.98[ASN][1000 genomes]
rs986380	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422432	chr1:72821856-73148651	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv871873	chr1:72861847-72975877	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv870463	chr1:72861847-72995398	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv871758	chr1:72861847-72995398	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv830215	chr1:72869049-73029787	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv546563	chr1:72956037-73041879	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:72974800-72975600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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