Variant report

Variant	rs10505318
Chromosome Location	chr8:118620890-118620891
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:118531991..118534985-chr8:118618605..118620948,2	K562	blood:
2	chr8:118619974..118622515-chr8:118630290..118632485,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000164758	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7007678	1.00[MEX][hapmap]
rs7014610	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019636	chr8:118598433-118946091	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv539734	chr8:118598433-118946091	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1028387	chr8:118602105-118640162	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118615800-118621000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr8:118616000-118621400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr8:118616000-118627400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr8:118616000-118630400	Weak transcription	Aorta	Aorta
5	chr8:118619400-118621000	Weak transcription	HSMMtube	muscle
6	chr8:118620400-118621200	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr8:118620400-118623400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr8:118620400-118623800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr8:118620600-118623400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:118620600-118623800	Enhancers	Muscle Satellite Cultured Cells	--
11	chr8:118620800-118621000	Flanking Active TSS	NHEK	skin
12	chr8:118620800-118621800	Enhancers	HSMM	muscle
13	chr8:118620800-118622000	Enhancers	NHLF	lung
14	chr8:118620800-118622200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr8:118620800-118622400	Enhancers	Hela-S3	cervix
16	chr8:118620800-118623000	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr8:118620800-118623400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr8:118620800-118623600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr8:118620800-118623600	Enhancers	NH-A	brain
20	chr8:118620800-118623800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr8:118620800-118623800	Enhancers	HMEC	breast
22	chr8:118620800-118623800	Enhancers	NHDF-Ad	bronchial
23	chr8:118620800-118623800	Enhancers	Osteobl	bone

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