Variant report

Variant	rs10510967
Chromosome Location	chr3:67794965-67794966
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11127729	1.00[ASN][1000 genomes]
rs1156064	1.00[ASN][1000 genomes]
rs1459914	0.91[ASN][1000 genomes]
rs17043251	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34134719	0.81[AFR][1000 genomes]
rs4856884	1.00[ASN][1000 genomes]
rs7630256	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9841690	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470638	chr3:67367341-67814738	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	esv3359258	chr3:67589615-67828274	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1002010	chr3:67785913-68312064	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:67721400-67800400	Weak transcription	Left Ventricle	heart
2	chr3:67788000-67802800	Weak transcription	Right Ventricle	heart
3	chr3:67789400-67799600	Weak transcription	Aorta	Aorta
4	chr3:67790600-67795000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr3:67792000-67795400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr3:67792200-67795000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr3:67794600-67795000	ZNF genes & repeats	Ovary	ovary
8	chr3:67794600-67795400	Weak transcription	Primary T helper cells PMA-I stimulated	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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