Variant report
| Variant | rs1052838 |
|---|---|
| Chromosome Location | chr2:10142331-10142332 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:10101400-10144800 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr2:10115000-10148000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 3 | chr2:10124800-10143200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 4 | chr2:10124800-10149400 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr2:10125000-10147600 | Weak transcription | K562 | blood |
| 6 | chr2:10125000-10149400 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr2:10125200-10150000 | Weak transcription | Brain Hippocampus Middle | brain |
| 8 | chr2:10126000-10144000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr2:10128000-10142800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr2:10128000-10146400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 11 | chr2:10131600-10149600 | Weak transcription | Brain Substantia Nigra | brain |
| 12 | chr2:10132200-10145200 | Weak transcription | Fetal Intestine Large | intestine |
| 13 | chr2:10132200-10146800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 14 | chr2:10132400-10146400 | Weak transcription | Left Ventricle | heart |
| 15 | chr2:10132400-10146800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 16 | chr2:10133200-10146400 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr2:10133400-10144200 | Strong transcription | Esophagus | oesophagus |
| 18 | chr2:10134000-10145600 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr2:10134000-10145800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 20 | chr2:10134200-10147000 | Weak transcription | HSMMtube | muscle |
| 21 | chr2:10134400-10144000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 22 | chr2:10134800-10150600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 23 | chr2:10135400-10146400 | Weak transcription | HUVEC | blood vessel |
| 24 | chr2:10136000-10144600 | Weak transcription | Spleen | Spleen |
| 25 | chr2:10137000-10148000 | Weak transcription | Hela-S3 | cervix |
| 26 | chr2:10137200-10144600 | Weak transcription | Brain Angular Gyrus | brain |
| 27 | chr2:10137200-10146200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr2:10137600-10142400 | Weak transcription | Adipose Nuclei | Adipose |
| 29 | chr2:10137600-10142800 | Weak transcription | NHDF-Ad | bronchial |
| 30 | chr2:10137600-10143400 | Strong transcription | Placenta | Placenta |
| 31 | chr2:10137600-10146400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr2:10137600-10146600 | Weak transcription | Fetal Heart | heart |
| 33 | chr2:10137600-10146800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 34 | chr2:10137600-10149800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 35 | chr2:10137800-10146400 | Weak transcription | Fetal Brain Female | brain |
| 36 | chr2:10138400-10143000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 37 | chr2:10139400-10143000 | Weak transcription | Pancreas | Pancrea |
| 38 | chr2:10139600-10143000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 39 | chr2:10139600-10147000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 40 | chr2:10139800-10142800 | Weak transcription | Fetal Stomach | stomach |
| 41 | chr2:10139800-10146400 | Weak transcription | Gastric | stomach |
| 42 | chr2:10139800-10150400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 43 | chr2:10141000-10144600 | Weak transcription | Fetal Muscle Leg | muscle |
| 44 | chr2:10141000-10147000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 45 | chr2:10141200-10143000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 46 | chr2:10141200-10143200 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 47 | chr2:10141400-10144000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 48 | chr2:10141400-10145200 | Weak transcription | Fetal Intestine Small | intestine |
| 49 | chr2:10141400-10146400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 50 | chr2:10141400-10146800 | Weak transcription | Lung | lung |
