The 2.0 version of rSNPBase

Variant report

Variant rs1053068
Chromosome Location chr6:118029336-118029337
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:117999000-118039800 Weak transcription Gastric stomach
2 chr6:117999000-118042000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:117999200-118029600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr6:118000800-118029400 Weak transcription Brain Cingulate Gyrus brain
5 chr6:118008800-118029600 Weak transcription Colonic Mucosa Colon
6 chr6:118009400-118039800 Weak transcription Small Intestine intestine
7 chr6:118012600-118039600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr6:118015600-118030200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:118016600-118029400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr6:118016600-118040000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:118016800-118029400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr6:118016800-118032400 Weak transcription Fetal Stomach stomach
13 chr6:118017000-118029800 Weak transcription Brain Substantia Nigra brain
14 chr6:118017000-118033200 Weak transcription Fetal Intestine Small intestine
15 chr6:118017000-118040000 Weak transcription Pancreas Pancrea
16 chr6:118017600-118029400 Weak transcription Rectal Smooth Muscle rectum
17 chr6:118017800-118029400 Weak transcription Fetal Brain Male brain
18 chr6:118018000-118029600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr6:118018000-118029600 Weak transcription Psoas Muscle Psoas
20 chr6:118021600-118032600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr6:118025600-118034200 Weak transcription HMEC breast
22 chr6:118026800-118029400 Weak transcription H9 Cell Line embryonic stem cell
23 chr6:118026800-118032000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr6:118026800-118034200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr6:118026800-118034200 Weak transcription Aorta Aorta
26 chr6:118027000-118034200 Weak transcription Right Ventricle heart
27 chr6:118027200-118029600 Weak transcription Brain Anterior Caudate brain
28 chr6:118027200-118032600 Weak transcription HSMMtube muscle
29 chr6:118027400-118029600 Weak transcription Fetal Muscle Leg muscle
30 chr6:118027400-118040000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr6:118027800-118031000 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr6:118027800-118034400 Weak transcription Primary B cells from cord blood blood
33 chr6:118028000-118029600 Weak transcription Placenta Amnion Placenta Amnion
34 chr6:118028000-118032400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr6:118028000-118032400 Weak transcription HSMM muscle
36 chr6:118028000-118032600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr6:118028000-118034000 Weak transcription Muscle Satellite Cultured Cells --
38 chr6:118028000-118034000 Weak transcription Stomach Smooth Muscle stomach
39 chr6:118028000-118034000 Weak transcription HUVEC blood vessel
40 chr6:118028000-118034200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr6:118028000-118034200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:118028000-118034200 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr6:118028000-118034600 Weak transcription Osteobl bone
44 chr6:118028200-118029800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr6:118028200-118029800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr6:118028200-118029800 Weak transcription Brain Angular Gyrus brain
47 chr6:118028200-118029800 Weak transcription Brain Germinal Matrix brain
48 chr6:118028200-118029800 Weak transcription Brain Inferior Temporal Lobe brain
49 chr6:118028200-118029800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr6:118028200-118029800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015