Variant report

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933208	chr5:41879946-42876624	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	112 gene(s)	inside rSNPs	diseases
2	nsv492147	chr5:41902086-42896162	Enhancers Flanking Active TSS Active TSS Genic enhancers Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	113 gene(s)	inside rSNPs	diseases
3	nsv948514	chr5:42270161-42519262	Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3334173	chr5:42469395-42471393	Weak transcription Strong transcription Enhancers ZNF genes & repeats	TF binding region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:42454800-42471800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr5:42455000-42474400	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr5:42455000-42477400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr5:42462000-42471600	Weak transcription	Fetal Intestine Large	intestine
5	chr5:42462000-42472000	Weak transcription	Fetal Lung	lung
6	chr5:42462200-42470400	Weak transcription	Fetal Intestine Small	intestine
7	chr5:42462200-42470800	Weak transcription	Aorta	Aorta
8	chr5:42462200-42470800	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr5:42462200-42471000	Weak transcription	Ovary	ovary
10	chr5:42462200-42471600	Weak transcription	Psoas Muscle	Psoas
11	chr5:42462200-42472200	Weak transcription	Fetal Heart	heart
12	chr5:42466800-42472400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr5:42467800-42470400	Weak transcription	Fetal Muscle Trunk	muscle
14	chr5:42468200-42472600	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr5:42468400-42484000	Weak transcription	Fetal Muscle Leg	muscle
16	chr5:42469200-42471400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr5:42469200-42471400	Weak transcription	Fetal Stomach	stomach
18	chr5:42469800-42472400	Weak transcription	Right Ventricle	heart
19	chr5:42470000-42473200	Weak transcription	Adipose Nuclei	Adipose
20	chr5:42470000-42483000	Weak transcription	Liver	Liver

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