Variant report

Variant	rs10733757
Chromosome Location	chr10:61819049-61819050
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61810823..61813906-chr10:61818082..61821174,3	K562	blood:

Variant related genes	Relation type
ENSG00000151150	Chromatin interaction

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10740006	1.00[CHB][hapmap]
rs10761446	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs10821665	0.85[CEU][hapmap]
rs10821667	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10821668	1.00[CHB][hapmap]
rs10994174	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes]
rs10994180	1.00[CHB][hapmap]
rs12354956	0.92[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4372392	0.92[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7902905	1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs7919250	0.97[ASN][1000 genomes]

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61789000-61819200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:61789600-61827800	Weak transcription	Fetal Brain Female	brain
3	chr10:61790200-61835000	Weak transcription	Primary T cells from cord blood	blood
4	chr10:61791600-61828600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr10:61791800-61829400	Weak transcription	Fetal Intestine Small	intestine
6	chr10:61791800-61849000	Weak transcription	Pancreas	Pancrea
7	chr10:61792200-61883200	Weak transcription	Psoas Muscle	Psoas
8	chr10:61796000-61834800	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr10:61797200-61828200	Weak transcription	Fetal Muscle Leg	muscle
10	chr10:61797600-61827600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
11	chr10:61798200-61844400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr10:61801800-61832600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr10:61802800-61828400	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr10:61803000-61827800	Weak transcription	Fetal Kidney	kidney
15	chr10:61803600-61835000	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr10:61803800-61834200	Weak transcription	Brain Angular Gyrus	brain
17	chr10:61803800-61835000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr10:61804000-61829800	Weak transcription	Fetal Stomach	stomach
19	chr10:61804000-61835000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr10:61805000-61835400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
21	chr10:61805400-61834200	Weak transcription	Brain Anterior Caudate	brain
22	chr10:61805600-61827800	Weak transcription	Right Ventricle	heart
23	chr10:61805600-61859800	Weak transcription	Brain Substantia Nigra	brain
24	chr10:61806000-61847800	Weak transcription	Fetal Lung	lung
25	chr10:61806200-61835000	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr10:61808000-61833400	Weak transcription	HUES64 Cell Line	embryonic stem cell
27	chr10:61808400-61819200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr10:61808400-61834400	Weak transcription	Fetal Heart	heart
29	chr10:61808400-61835000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr10:61810400-61834800	Weak transcription	Duodenum Mucosa	Duodenum
31	chr10:61811200-61827600	Weak transcription	Fetal Brain Male	brain
32	chr10:61813200-61819600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr10:61813200-61820800	Strong transcription	Skeletal Muscle Female	skeletal muscle
34	chr10:61813600-61834800	Weak transcription	Liver	Liver
35	chr10:61813600-61837600	Weak transcription	Lung	lung
36	chr10:61814000-61832600	Weak transcription	Fetal Muscle Trunk	muscle
37	chr10:61814000-61833600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr10:61814200-61820800	Strong transcription	Primary T helper cells fromperipheralblood	blood
39	chr10:61814400-61848800	Weak transcription	Gastric	stomach
40	chr10:61814800-61821000	Strong transcription	Placenta	Placenta
41	chr10:61814800-61829600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr10:61815000-61834800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
43	chr10:61815000-61835200	Weak transcription	Ovary	ovary
44	chr10:61815200-61823000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr10:61815200-61828000	Weak transcription	HSMMtube	muscle
46	chr10:61815600-61827800	Weak transcription	Skeletal Muscle Male	skeletal muscle
47	chr10:61815800-61820400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr10:61815800-61834200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr10:61815800-61835000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr10:61816000-61820400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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