Variant report

Variant	rs10736681
Chromosome Location	chr11:56989689-56989690
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:56989037..56991877-chr11:56993430..56996007,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2282625	0.81[ASN][1000 genomes]
rs4939115	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915640	chr11:56814841-57139786	Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv482317	chr11:56857026-57028631	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:56982600-56991000	Weak transcription	Osteobl	bone
2	chr11:56982600-56991800	Weak transcription	NHDF-Ad	bronchial
3	chr11:56984800-56991000	Weak transcription	HSMMtube	muscle
4	chr11:56984800-56991200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:56987000-56991400	Weak transcription	Brain Anterior Caudate	brain
6	chr11:56987200-56991200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr11:56987200-56991400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr11:56987200-56995200	Weak transcription	Left Ventricle	heart
9	chr11:56987600-56990200	Weak transcription	Fetal Muscle Leg	muscle
10	chr11:56987600-57000800	Weak transcription	Spleen	Spleen
11	chr11:56988600-56992400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr11:56988600-56992400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr11:56988600-56992800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr11:56989000-56991600	Enhancers	Muscle Satellite Cultured Cells	--
15	chr11:56989200-56989800	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr11:56989200-56990000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr11:56989200-56990200	Enhancers	Primary hematopoietic stem cells short term culture	blood
18	chr11:56989200-56990400	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr11:56989400-56990000	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr11:56989400-56990400	Enhancers	HUVEC	blood vessel
21	chr11:56989600-56989800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr11:56989600-56990000	Enhancers	HSMM	muscle
23	chr11:56989600-56990200	Enhancers	H9 Cell Line	embryonic stem cell
24	chr11:56989600-56990400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr11:56989600-56990400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr11:56989600-56990600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr11:56989600-56992800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr11:56989600-56997800	Weak transcription	Adipose Nuclei	Adipose

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