Variant report

Variant	rs10790466
Chromosome Location	chr11:121773636-121773637
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10750197	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1078401	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1078402	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10790465	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10790468	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10790469	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10790470	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10790471	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10790473	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10790474	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10790475	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10790476	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1219408	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1219410	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1219413	0.83[EUR][1000 genomes]
rs1219418	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1219421	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12361448	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12417120	0.82[ASN][1000 genomes]
rs1530664	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3802910	0.91[ASN][1000 genomes]
rs3862608	0.84[ASN][1000 genomes]
rs6589900	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs747916	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs747918	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs949086	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs949087	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121767400-121775600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr11:121767400-121775600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:121769200-121776200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr11:121770000-121777800	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:121771600-121774400	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr11:121772600-121775800	Weak transcription	NHEK	skin
7	chr11:121773400-121773800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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