Variant report

Variant	rs1080953
Chromosome Location	chr8:102707647-102707648
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs6468789	0.87[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3401576	chr8:102640273-102724495	Weak transcription Genic enhancers Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102696600-102708400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr8:102697600-102713000	Weak transcription	Psoas Muscle	Psoas
3	chr8:102699600-102714800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr8:102700000-102730600	Weak transcription	Aorta	Aorta
5	chr8:102701200-102713200	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr8:102701600-102708600	Weak transcription	GM12878-XiMat	blood
7	chr8:102701800-102709400	Weak transcription	Gastric	stomach
8	chr8:102702000-102715600	Weak transcription	Pancreas	Pancrea
9	chr8:102702200-102708600	Weak transcription	Primary T cells from cord blood	blood
10	chr8:102702400-102713000	Weak transcription	Lung	lung
11	chr8:102703200-102708000	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr8:102703200-102708200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr8:102703200-102712400	Weak transcription	Right Ventricle	heart
14	chr8:102703600-102708600	Weak transcription	Adipose Nuclei	Adipose
15	chr8:102703800-102708200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr8:102703800-102712600	Weak transcription	Liver	Liver
17	chr8:102703800-102713000	Weak transcription	Left Ventricle	heart
18	chr8:102704200-102713200	Weak transcription	Rectal Smooth Muscle	rectum
19	chr8:102704600-102712000	Weak transcription	Fetal Intestine Small	intestine
20	chr8:102704600-102712600	Weak transcription	Colon Smooth Muscle	Colon
21	chr8:102705000-102712600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr8:102705200-102708600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr8:102705600-102715800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr8:102705800-102709200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr8:102706000-102707800	Enhancers	Ovary	ovary
26	chr8:102706000-102712600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr8:102706200-102708400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr8:102706400-102712600	Weak transcription	Fetal Stomach	stomach
29	chr8:102706800-102713000	Weak transcription	Stomach Smooth Muscle	stomach
30	chr8:102707200-102707800	Strong transcription	Fetal Muscle Leg	muscle
31	chr8:102707200-102708000	Strong transcription	Fetal Muscle Trunk	muscle
32	chr8:102707200-102712600	Weak transcription	Fetal Thymus	thymus

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