Variant report

Variant	rs10832371
Chromosome Location	chr11:15222118-15222119
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11023463	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11023470	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1792581	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038154	chr11:14991411-15246500	Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv540950	chr11:14991411-15246500	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv897007	chr11:14991411-15260124	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv530217	chr11:14991411-15275034	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	esv2830370	chr11:15142247-15444094	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
6	nsv897010	chr11:15219258-15279421	Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15216200-15222200	Enhancers	Muscle Satellite Cultured Cells	--
2	chr11:15217200-15222600	Enhancers	Liver	Liver
3	chr11:15218600-15229400	Weak transcription	Gastric	stomach
4	chr11:15218800-15222600	Enhancers	Fetal Brain Male	brain
5	chr11:15219200-15234600	Weak transcription	Fetal Intestine Small	intestine
6	chr11:15219400-15223000	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr11:15219400-15223200	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:15219800-15222400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr11:15220200-15222600	Weak transcription	Fetal Stomach	stomach
10	chr11:15220600-15222200	Enhancers	Fetal Muscle Leg	muscle
11	chr11:15221000-15222600	Enhancers	Psoas Muscle	Psoas
12	chr11:15221000-15222800	Enhancers	Brain Germinal Matrix	brain
13	chr11:15221000-15222800	Enhancers	Pancreas	Pancrea
14	chr11:15221200-15222200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr11:15221200-15222200	Enhancers	Left Ventricle	heart
16	chr11:15221600-15223000	Weak transcription	HSMMtube	muscle
17	chr11:15221600-15227600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr11:15221800-15222400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr11:15221800-15226800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr11:15222000-15222200	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr11:15222000-15222200	Bivalent Enhancer	Fetal Muscle Trunk	muscle

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