Variant report

Variant	rs10836119
Chromosome Location	chr11:33865058-33865059
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11032416	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs66535760	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs10836119	CD59	Cis_1M	lymphoblastoid	RTeQTL
rs10836119	CD59	cis	Artery Tibial	GTEx

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33864400-33872400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr11:33864400-33874000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:33864400-33874200	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr11:33864600-33866600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr11:33864800-33880600	Weak transcription	Brain Anterior Caudate	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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