Variant report

Variant	rs10842684
Chromosome Location	chr12:26320071-26320072
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1473431	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1480034	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1480035	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4517620	0.84[ASN][1000 genomes]
rs55775247	0.83[ASN][1000 genomes]
rs55804516	0.95[ASN][1000 genomes]
rs56198343	0.92[EUR][1000 genomes]
rs6487539	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6487540	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6487541	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73082972	0.82[ASN][1000 genomes]
rs73084743	0.84[ASN][1000 genomes]
rs73084753	0.84[ASN][1000 genomes]
rs73084765	0.84[ASN][1000 genomes]
rs7979281	0.92[EUR][1000 genomes]
rs875296	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9804706	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26319000-26320200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr12:26319000-26321400	Weak transcription	Brain Substantia Nigra	brain
3	chr12:26319000-26325200	Weak transcription	Brain Anterior Caudate	brain
4	chr12:26319400-26321000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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