Variant report

Variant	rs10850907
Chromosome Location	chr12:118275451-118275452
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:117649820..117651043-chr12:118274697..118275665,4	K562	blood:
2	chr12:118028588..118029465-chr12:118274785..118275608,2	MCF-7	breast:
3	chr12:117804617..117805433-chr12:118274675..118275873,4	MCF-7	breast:
4	chr12:117803198..117804891-chr12:118275009..118276733,2	MCF-7	breast:
5	chr12:118109172..118110250-chr12:118274729..118275857,10	MCF-7	breast:
6	chr12:117804572..117805820-chr12:118274713..118275534,9	K562	blood:
7	chr12:117673979..117674986-chr12:118274764..118275623,4	K562	blood:
8	chr12:118151742..118152656-chr12:118274941..118275658,2	MCF-7	breast:
9	chr12:117650494..117652487-chr12:118273816..118276438,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10850908	0.91[ASN][1000 genomes]
rs11068691	0.83[ASN][1000 genomes]
rs11068692	0.83[ASN][1000 genomes]
rs11068693	0.83[ASN][1000 genomes]
rs11068695	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12231482	0.83[ASN][1000 genomes]
rs2393327	0.95[ASN][1000 genomes]
rs34084814	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4328289	0.97[ASN][1000 genomes]
rs4516059	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56111943	0.93[EUR][1000 genomes]
rs56322070	0.84[ASN][1000 genomes]
rs56370061	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59114295	0.87[EUR][1000 genomes]
rs6490158	0.83[ASN][1000 genomes]
rs6490159	0.83[ASN][1000 genomes]
rs7133902	0.83[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118273800-118277400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:118274000-118275800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr12:118274400-118275600	Enhancers	A549	lung
4	chr12:118274400-118275800	Enhancers	H1 Cell Line	embryonic stem cell
5	chr12:118275000-118275600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr12:118275000-118275600	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr12:118275000-118275800	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr12:118275200-118275600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr12:118275200-118275600	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
10	chr12:118275200-118275800	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr12:118275200-118275800	Enhancers	Brain Inferior Temporal Lobe	brain
12	chr12:118275200-118276000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
13	chr12:118275200-118281800	Weak transcription	Brain Anterior Caudate	brain
14	chr12:118275400-118275600	Enhancers	iPS-20b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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