Variant report
Variant | rs10853825 |
---|---|
Chromosome Location | chr19:51306948-51306949 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:51302000-51307200 | Weak transcription | Aorta | Aorta |
2 | chr19:51302800-51307000 | Transcr. at gene 5' and 3' | Hela-S3 | cervix |
3 | chr19:51305200-51307000 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin03 | Skin |
4 | chr19:51305200-51307400 | Transcr. at gene 5' and 3' | Dnd41 | blood |
5 | chr19:51305400-51307000 | Enhancers | Placenta Amnion | Placenta Amnion |
6 | chr19:51305400-51307000 | Transcr. at gene 5' and 3' | K562 | blood |
7 | chr19:51305400-51307200 | Transcr. at gene 5' and 3' | iPS-20b Cell Line | embryonic stem cell |
8 | chr19:51305400-51307200 | Transcr. at gene 5' and 3' | Primary hematopoietic stem cells short term culture | blood |
9 | chr19:51305400-51307200 | Transcr. at gene 5' and 3' | A549 | lung |
10 | chr19:51305400-51307200 | Transcr. at gene 5' and 3' | NHEK | skin |
11 | chr19:51305600-51307000 | Transcr. at gene 5' and 3' | ES-UCSF4 Cell Line | embryonic stem cell |
12 | chr19:51305600-51307200 | Transcr. at gene 5' and 3' | HUES48 Cell Line | embryonic stem cell |
13 | chr19:51305600-51307200 | Transcr. at gene 5' and 3' | HUES6 Cell Line | embryonic stem cell |
14 | chr19:51305800-51307000 | Transcr. at gene 5' and 3' | ES-I3 Cell Line | embryonic stem cell |
15 | chr19:51305800-51307200 | Transcr. at gene 5' and 3' | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
16 | chr19:51305800-51307200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
17 | chr19:51305800-51307400 | Enhancers | Spleen | Spleen |
18 | chr19:51305800-51309000 | Active TSS | HUES64 Cell Line | embryonic stem cell |
19 | chr19:51306000-51307000 | Enhancers | Primary monocytes fromperipheralblood | blood |
20 | chr19:51306000-51307000 | Enhancers | Primary B cells from peripheral blood | blood |
21 | chr19:51306000-51307000 | Enhancers | Left Ventricle | heart |
22 | chr19:51306000-51307000 | Enhancers | Stomach Mucosa | stomach |
23 | chr19:51306000-51307200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
24 | chr19:51306000-51307200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
25 | chr19:51306000-51307200 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
26 | chr19:51306000-51307200 | Flanking Active TSS | Brain Germinal Matrix | brain |
27 | chr19:51306000-51307200 | Flanking Active TSS | HSMM | muscle |
28 | chr19:51306000-51307200 | Flanking Active TSS | HUVEC | blood vessel |
29 | chr19:51306000-51307200 | Flanking Active TSS | Osteobl | bone |
30 | chr19:51306000-51307400 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
31 | chr19:51306000-51307400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
32 | chr19:51306000-51307400 | Flanking Active TSS | Fetal Brain Female | brain |
33 | chr19:51306000-51307400 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
34 | chr19:51306000-51307400 | Flanking Active TSS | HSMMtube | muscle |
35 | chr19:51306000-51308600 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
36 | chr19:51306000-51308600 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
37 | chr19:51306000-51309000 | Active TSS | Colonic Mucosa | Colon |
38 | chr19:51306200-51307000 | Transcr. at gene 5' and 3' | Primary T helper cells PMA-I stimulated | -- |
39 | chr19:51306200-51307000 | Enhancers | Sigmoid Colon | Sigmoid Colon |
40 | chr19:51306200-51307200 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
41 | chr19:51306200-51307200 | Flanking Active TSS | Rectal Smooth Muscle | rectum |
42 | chr19:51306200-51307400 | Flanking Active TSS | Primary T killer memory cells from peripheral blood | blood |
43 | chr19:51306200-51307400 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
44 | chr19:51306200-51308200 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
45 | chr19:51306200-51308600 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
46 | chr19:51306200-51308600 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
47 | chr19:51306200-51308600 | Active TSS | Fetal Intestine Large | intestine |
48 | chr19:51306200-51308800 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
49 | chr19:51306200-51308800 | Active TSS | NHLF | lung |
50 | chr19:51306400-51307000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |