Variant report

Variant rs10853825
Chromosome Location chr19:51306948-51306949
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:51302000-51307200 Weak transcription Aorta Aorta
2 chr19:51302800-51307000 Transcr. at gene 5' and 3' Hela-S3 cervix
3 chr19:51305200-51307000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr19:51305200-51307400 Transcr. at gene 5' and 3' Dnd41 blood
5 chr19:51305400-51307000 Enhancers Placenta Amnion Placenta Amnion
6 chr19:51305400-51307000 Transcr. at gene 5' and 3' K562 blood
7 chr19:51305400-51307200 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
8 chr19:51305400-51307200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
9 chr19:51305400-51307200 Transcr. at gene 5' and 3' A549 lung
10 chr19:51305400-51307200 Transcr. at gene 5' and 3' NHEK skin
11 chr19:51305600-51307000 Transcr. at gene 5' and 3' ES-UCSF4 Cell Line embryonic stem cell
12 chr19:51305600-51307200 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
13 chr19:51305600-51307200 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
14 chr19:51305800-51307000 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
15 chr19:51305800-51307200 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:51305800-51307200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:51305800-51307400 Enhancers Spleen Spleen
18 chr19:51305800-51309000 Active TSS HUES64 Cell Line embryonic stem cell
19 chr19:51306000-51307000 Enhancers Primary monocytes fromperipheralblood blood
20 chr19:51306000-51307000 Enhancers Primary B cells from peripheral blood blood
21 chr19:51306000-51307000 Enhancers Left Ventricle heart
22 chr19:51306000-51307000 Enhancers Stomach Mucosa stomach
23 chr19:51306000-51307200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr19:51306000-51307200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr19:51306000-51307200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr19:51306000-51307200 Flanking Active TSS Brain Germinal Matrix brain
27 chr19:51306000-51307200 Flanking Active TSS HSMM muscle
28 chr19:51306000-51307200 Flanking Active TSS HUVEC blood vessel
29 chr19:51306000-51307200 Flanking Active TSS Osteobl bone
30 chr19:51306000-51307400 Flanking Active TSS Primary hematopoietic stem cells blood
31 chr19:51306000-51307400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr19:51306000-51307400 Flanking Active TSS Fetal Brain Female brain
33 chr19:51306000-51307400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
34 chr19:51306000-51307400 Flanking Active TSS HSMMtube muscle
35 chr19:51306000-51308600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr19:51306000-51308600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
37 chr19:51306000-51309000 Active TSS Colonic Mucosa Colon
38 chr19:51306200-51307000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
39 chr19:51306200-51307000 Enhancers Sigmoid Colon Sigmoid Colon
40 chr19:51306200-51307200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr19:51306200-51307200 Flanking Active TSS Rectal Smooth Muscle rectum
42 chr19:51306200-51307400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
43 chr19:51306200-51307400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
44 chr19:51306200-51308200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
45 chr19:51306200-51308600 Active TSS iPS-15b Cell Line embryonic stem cell
46 chr19:51306200-51308600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
47 chr19:51306200-51308600 Active TSS Fetal Intestine Large intestine
48 chr19:51306200-51308800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr19:51306200-51308800 Active TSS NHLF lung
50 chr19:51306400-51307000 Enhancers Primary Natural Killer cells fromperipheralblood blood

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