Variant report

Variant rs10854003
Chromosome Location chr19:18763596-18763597
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18748600-18774400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr19:18749200-18768200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr19:18749200-18778400 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:18749400-18774000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr19:18755800-18764000 Enhancers Right Ventricle heart
6 chr19:18755800-18766600 Weak transcription HepG2 liver
7 chr19:18756400-18778400 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr19:18759400-18776200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr19:18759800-18778400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr19:18760000-18770000 Weak transcription Gastric stomach
11 chr19:18760000-18770000 Weak transcription Stomach Mucosa stomach
12 chr19:18760200-18775000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr19:18760400-18774000 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr19:18760400-18794800 Weak transcription Placenta Amnion Placenta Amnion
15 chr19:18760600-18774800 Weak transcription Thymus Thymus
16 chr19:18760800-18763600 Weak transcription Primary T cells fromperipheralblood blood
17 chr19:18760800-18764200 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr19:18760800-18765200 Weak transcription Fetal Brain Female brain
19 chr19:18760800-18776200 Weak transcription Liver Liver
20 chr19:18760800-18778400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr19:18761000-18767200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr19:18761000-18767800 Weak transcription GM12878-XiMat blood
23 chr19:18761200-18768000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr19:18761200-18768000 Weak transcription Brain Cingulate Gyrus brain
25 chr19:18761200-18769600 Weak transcription Primary monocytes fromperipheralblood blood
26 chr19:18761400-18766200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr19:18761600-18764000 Enhancers Fetal Muscle Leg muscle
28 chr19:18761600-18764200 Strong transcription Fetal Intestine Small intestine
29 chr19:18761600-18769600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr19:18761800-18768000 Weak transcription Fetal Intestine Large intestine
31 chr19:18762000-18764000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr19:18762000-18764000 Enhancers Skeletal Muscle Female skeletal muscle
33 chr19:18762000-18765400 Weak transcription Fetal Kidney kidney
34 chr19:18762000-18766800 Weak transcription Brain Inferior Temporal Lobe brain
35 chr19:18762000-18767400 Weak transcription Brain Substantia Nigra brain
36 chr19:18762000-18768600 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr19:18762000-18770200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr19:18762200-18764000 Enhancers Spleen Spleen
39 chr19:18762200-18767800 Weak transcription Brain Germinal Matrix brain
40 chr19:18762200-18771200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr19:18762400-18763600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr19:18762400-18764000 Enhancers Pancreas Pancrea
43 chr19:18762400-18768400 Weak transcription Colonic Mucosa Colon
44 chr19:18762600-18763800 Enhancers Skeletal Muscle Male skeletal muscle
45 chr19:18762600-18766800 Weak transcription Fetal Heart heart
46 chr19:18762600-18767800 Weak transcription Brain Angular Gyrus brain
47 chr19:18762600-18767800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr19:18762600-18768000 Weak transcription Rectal Smooth Muscle rectum
49 chr19:18762600-18768200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr19:18762600-18774600 Weak transcription Primary T cells from cord blood blood

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