Variant report

Variant	rs10868713
Chromosome Location	chr9:72825914-72825915
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10780898	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047862	chr9:72746875-73138287	Enhancers Strong transcription Genic enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72793000-72842600	Weak transcription	Rectal Smooth Muscle	rectum
2	chr9:72802000-72827000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr9:72809600-72837800	Weak transcription	NH-A	brain
4	chr9:72810800-72827800	Weak transcription	Colon Smooth Muscle	Colon
5	chr9:72820600-72826800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr9:72820800-72827200	Weak transcription	Left Ventricle	heart
7	chr9:72820800-72827200	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr9:72820800-72835400	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr9:72821000-72827200	Weak transcription	Duodenum Mucosa	Duodenum
10	chr9:72821000-72827400	Weak transcription	HSMM	muscle
11	chr9:72821200-72827200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr9:72821200-72827400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr9:72821200-72828200	Weak transcription	HSMMtube	muscle
14	chr9:72821200-72844800	Weak transcription	HMEC	breast
15	chr9:72821400-72826000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr9:72821400-72827600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr9:72821400-72829800	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr9:72821400-72830200	Weak transcription	Stomach Smooth Muscle	stomach
19	chr9:72821400-72832000	Weak transcription	NHEK	skin
20	chr9:72825600-72827200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr9:72825600-72833200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr9:72825800-72826400	Weak transcription	Fetal Lung	lung

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