Variant report

Variant	rs10872616
Chromosome Location	chr6:148929617-148929618
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1475143	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1570363	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56078672	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs911979	0.82[AMR][1000 genomes]
rs911980	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322152	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:148929400-148929800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:148929600-148930000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:148929600-148930000	Enhancers	NHDF-Ad	bronchial
4	chr6:148929600-148930200	Enhancers	Colon Smooth Muscle	Colon
5	chr6:148929600-148930200	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr6:148929600-148930600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links