The 2.0 version of rSNPBase

Variant report

Variant rs10875892
Chromosome Location chr12:49310725-49310726
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49298200-49315800 Weak transcription H9 Cell Line embryonic stem cell
2 chr12:49298200-49318200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr12:49298400-49310800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr12:49298400-49310800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr12:49298400-49311400 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr12:49298400-49313400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr12:49298400-49314800 Weak transcription Lung lung
8 chr12:49298400-49315000 Weak transcription Osteobl bone
9 chr12:49298400-49317800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr12:49298400-49318000 Weak transcription Muscle Satellite Cultured Cells --
11 chr12:49298400-49318000 Weak transcription Brain Substantia Nigra brain
12 chr12:49298400-49318000 Weak transcription Rectal Smooth Muscle rectum
13 chr12:49298400-49318200 Weak transcription Brain Inferior Temporal Lobe brain
14 chr12:49298400-49318200 Weak transcription Right Atrium heart
15 chr12:49298400-49318400 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr12:49298600-49315000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr12:49298600-49315000 Weak transcription Fetal Muscle Trunk muscle
18 chr12:49298600-49316000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr12:49298600-49318200 Weak transcription Brain Anterior Caudate brain
20 chr12:49298800-49315400 Weak transcription Fetal Muscle Leg muscle
21 chr12:49298800-49315800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr12:49298800-49318000 Weak transcription Fetal Lung lung
23 chr12:49298800-49318200 Weak transcription Fetal Brain Male brain
24 chr12:49299400-49315000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr12:49301800-49315600 Weak transcription Duodenum Mucosa Duodenum
26 chr12:49302000-49318200 Weak transcription Brain Germinal Matrix brain
27 chr12:49302200-49315400 Weak transcription Pancreas Pancrea
28 chr12:49302800-49311400 Weak transcription HSMMtube muscle
29 chr12:49302800-49317800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr12:49304200-49314600 Weak transcription A549 lung
31 chr12:49304200-49314800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr12:49305000-49314800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr12:49305000-49318400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr12:49305200-49311000 Weak transcription Thymus Thymus
35 chr12:49305200-49317600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr12:49305400-49311600 Weak transcription HSMM muscle
37 chr12:49305800-49311200 Weak transcription Primary hematopoietic stem cells blood
38 chr12:49306800-49310800 Weak transcription Primary T cells fromperipheralblood blood
39 chr12:49306800-49311200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr12:49307000-49315600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr12:49307200-49311800 Weak transcription NHEK skin
42 chr12:49307800-49318200 Weak transcription Brain Angular Gyrus brain
43 chr12:49308200-49314800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:49308400-49311400 Weak transcription HepG2 liver
45 chr12:49308600-49315000 Weak transcription Fetal Intestine Small intestine
46 chr12:49308600-49315000 Weak transcription Fetal Stomach stomach
47 chr12:49308800-49315000 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr12:49308800-49318200 Weak transcription Fetal Brain Female brain
49 chr12:49309000-49317800 Weak transcription Placenta Amnion Placenta Amnion
50 chr12:49309200-49314600 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015