The 2.0 version of rSNPBase

Variant report

Variant rs10875977
Chromosome Location chr12:50234989-50234990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50222800-50235400 Weak transcription Ovary ovary
2 chr12:50222800-50236200 Weak transcription Aorta Aorta
3 chr12:50223000-50235000 Weak transcription Brain Inferior Temporal Lobe brain
4 chr12:50223000-50235400 Weak transcription Brain Anterior Caudate brain
5 chr12:50223000-50235400 Weak transcription Left Ventricle heart
6 chr12:50223000-50235600 Weak transcription Brain Substantia Nigra brain
7 chr12:50223000-50236000 Weak transcription Lung lung
8 chr12:50223200-50235200 Weak transcription Primary hematopoietic stem cells blood
9 chr12:50223200-50235200 Weak transcription Liver Liver
10 chr12:50223200-50235200 Weak transcription HSMM muscle
11 chr12:50223200-50235400 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr12:50223200-50235400 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr12:50223200-50235400 Weak transcription Adipose Nuclei Adipose
14 chr12:50223200-50235400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr12:50223200-50235400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr12:50223200-50235400 Weak transcription Thymus Thymus
17 chr12:50223200-50235400 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr12:50223200-50235400 Weak transcription NHDF-Ad bronchial
19 chr12:50223200-50235600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr12:50223400-50235000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr12:50223400-50235000 Weak transcription Primary T cells from cord blood blood
22 chr12:50223400-50235000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr12:50223400-50235000 Weak transcription Hela-S3 cervix
24 chr12:50223400-50235200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr12:50223400-50235200 Weak transcription Primary B cells from peripheral blood blood
26 chr12:50223400-50235200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr12:50223400-50235200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr12:50223400-50235200 Weak transcription Colon Smooth Muscle Colon
29 chr12:50223400-50235200 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr12:50223400-50235200 Weak transcription Fetal Intestine Large intestine
31 chr12:50223400-50235200 Weak transcription Fetal Intestine Small intestine
32 chr12:50223400-50235200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr12:50223400-50235400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr12:50223400-50235400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr12:50223400-50235400 Weak transcription Fetal Lung lung
36 chr12:50223400-50235400 Weak transcription Fetal Stomach stomach
37 chr12:50223400-50235600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr12:50223400-50235600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr12:50223400-50235600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr12:50223400-50235600 Weak transcription Gastric stomach
41 chr12:50223400-50235600 Weak transcription Right Atrium heart
42 chr12:50227000-50235000 Weak transcription HMEC breast
43 chr12:50227000-50235400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr12:50227200-50235000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr12:50227200-50235000 Weak transcription NHEK skin
46 chr12:50227200-50235200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr12:50227200-50235200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr12:50227200-50235400 Weak transcription HSMMtube muscle
49 chr12:50227200-50235400 Weak transcription Osteobl bone
50 chr12:50227400-50235000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015