The 2.0 version of rSNPBase

Variant report

Variant rs10899856
Chromosome Location chr10:44184634-44184635
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:44174400-44185000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr10:44179600-44184800 Weak transcription NHDF-Ad bronchial
3 chr10:44179600-44185000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr10:44179600-44185000 Weak transcription Osteobl bone
5 chr10:44181600-44185000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr10:44182000-44184800 Weak transcription Adipose Nuclei Adipose
7 chr10:44182000-44184800 Weak transcription Left Ventricle heart
8 chr10:44182000-44184800 Weak transcription Right Atrium heart
9 chr10:44182000-44184800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr10:44182200-44184800 Weak transcription Right Ventricle heart
11 chr10:44183000-44184800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
12 chr10:44184000-44184800 Enhancers NH-A brain
13 chr10:44184000-44185200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr10:44184200-44184800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr10:44184200-44184800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr10:44184200-44186200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
17 chr10:44184400-44184800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
18 chr10:44184400-44184800 Enhancers Placenta Amnion Placenta Amnion
19 chr10:44184400-44185200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
20 chr10:44184600-44184800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr10:44184600-44184800 Enhancers Primary monocytes fromperipheralblood blood
22 chr10:44184600-44184800 Bivalent Enhancer Primary T cells fromperipheralblood blood
23 chr10:44184600-44184800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr10:44184600-44184800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr10:44184600-44184800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
26 chr10:44184600-44184800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr10:44184600-44184800 Bivalent Enhancer Brain Germinal Matrix brain
28 chr10:44184600-44184800 Enhancers Colonic Mucosa Colon
29 chr10:44184600-44184800 Enhancers Duodenum Smooth Muscle Duodenum
30 chr10:44184600-44184800 Enhancers Esophagus oesophagus
31 chr10:44184600-44184800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
32 chr10:44184600-44184800 Enhancers Fetal Brain Female brain
33 chr10:44184600-44184800 Enhancers Fetal Heart heart
34 chr10:44184600-44184800 Bivalent Enhancer Fetal Intestine Large intestine
35 chr10:44184600-44184800 Bivalent Enhancer Fetal Muscle Trunk muscle
36 chr10:44184600-44184800 Bivalent Enhancer Fetal Muscle Leg muscle
37 chr10:44184600-44184800 Bivalent Enhancer Fetal Stomach stomach
38 chr10:44184600-44184800 Enhancers Pancreas Pancrea
39 chr10:44184600-44184800 Enhancers Rectal Mucosa Donor 31 rectum
40 chr10:44184600-44184800 Enhancers Stomach Smooth Muscle stomach
41 chr10:44184600-44185000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr10:44184600-44185000 Bivalent Enhancer Placenta Placenta
43 chr10:44184600-44185000 Enhancers Lung lung
44 chr10:44184600-44185200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr10:44184600-44185400 Flanking Active TSS Primary hematopoietic stem cells blood
46 chr10:44184600-44185400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr10:44184600-44185800 Enhancers Fetal Brain Male brain
48 chr10:44184600-44186200 Enhancers Spleen Spleen
49 chr10:44184600-44186600 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015