Variant report

Variant	rs10911156
Chromosome Location	chr1:172142128-172142129
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10911008	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs10911026	1.00[AMR][1000 genomes]
rs10911144	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12058378	1.00[AMR][1000 genomes]
rs12074285	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12083886	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12354088	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6660156	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172123400-172149200	Weak transcription	Brain Anterior Caudate	brain
2	chr1:172128400-172149800	Weak transcription	Aorta	Aorta
3	chr1:172132800-172150000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr1:172138000-172143600	Weak transcription	Fetal Brain Male	brain
5	chr1:172138200-172147800	Weak transcription	Brain Angular Gyrus	brain
6	chr1:172138400-172145000	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr1:172138400-172149800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr1:172138600-172143600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr1:172138600-172147600	Weak transcription	Small Intestine	intestine
10	chr1:172138600-172147800	Weak transcription	Brain Hippocampus Middle	brain
11	chr1:172138600-172147800	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr1:172139600-172148000	Weak transcription	Fetal Stomach	stomach
13	chr1:172140200-172146800	Weak transcription	Fetal Intestine Small	intestine
14	chr1:172141400-172142200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr1:172141400-172142400	Enhancers	NHLF	lung
16	chr1:172141800-172142200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr1:172141800-172142400	Enhancers	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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