Variant report
Variant | rs10911540 |
---|---|
Chromosome Location | chr1:184203608-184203609 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10797947 | 0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs10911530 | 0.80[EUR][1000 genomes] |
rs10911539 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12139463 | 0.81[EUR][1000 genomes] |
rs2081401 | 0.81[EUR][1000 genomes] |
rs2081403 | 0.81[EUR][1000 genomes] |
rs2151172 | 0.80[EUR][1000 genomes] |
rs2161988 | 0.80[EUR][1000 genomes] |
rs4292918 | 0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs4342818 | 0.88[ASN][1000 genomes] |
rs4651186 | 0.81[EUR][1000 genomes] |
rs4651189 | 0.81[EUR][1000 genomes] |
rs4651191 | 0.80[EUR][1000 genomes] |
rs56308906 | 0.81[EUR][1000 genomes] |
rs6424937 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6424939 | 0.88[ASN][1000 genomes] |
rs6676366 | 0.81[EUR][1000 genomes] |
rs6689088 | 0.81[EUR][1000 genomes] |
rs7549600 | 0.81[EUR][1000 genomes] |
rs9803635 | 0.81[EUR][1000 genomes] |
rs9803849 | 0.81[EUR][1000 genomes] |
rs9803931 | 0.81[EUR][1000 genomes] |
rs9804048 | 0.81[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv530079 | chr1:183797938-184639971 | Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 21 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:184197200-184209200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |