Variant report

Variant	rs10911865
Chromosome Location	chr1:172498878-172498879
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	IRF1	chr1:172498819-172499744	K562	blood:	n/a	n/a
2	JUND	chr1:172498627-172499580	K562	blood:	n/a	n/a
3	GATA3	chr1:172498657-172499874	MCF-7	breast:	n/a	n/a

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172411084..172422561-chr1:172496524..172504623,44	MCF-7	breast:
2	chr1:172486127..172488704-chr1:172497575..172501072,3	MCF-7	breast:
3	chr1:172439490..172443248-chr1:172495023..172498932,4	MCF-7	breast:
4	chr1:172440495..172444630-chr1:172497465..172500697,4	MCF-7	breast:
5	chr1:172469701..172471621-chr1:172497308..172500120,2	K562	blood:
6	chr1:172398685..172401320-chr1:172498374..172501094,2	MCF-7	breast:
7	chr1:172412087..172424934-chr1:172497120..172505334,59	MCF-7	breast:

No data

No data

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172487800-172499000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr1:172492600-172499000	Weak transcription	K562	blood
3	chr1:172495800-172500400	Weak transcription	Fetal Intestine Small	intestine
4	chr1:172498200-172500600	Enhancers	HepG2	liver
5	chr1:172498200-172501200	Enhancers	Placenta Amnion	Placenta Amnion
6	chr1:172498400-172500600	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr1:172498800-172500400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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