The 2.0 version of rSNPBase

Variant report

Variant rs10913529
Chromosome Location chr1:171679465-171679466
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171664400-171685800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:171664800-171684800 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:171665000-171692000 Weak transcription Brain Substantia Nigra brain
4 chr1:171665600-171705600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:171665600-171708800 Weak transcription Brain Angular Gyrus brain
6 chr1:171666000-171685000 Weak transcription Brain Germinal Matrix brain
7 chr1:171666000-171705400 Weak transcription Pancreas Pancrea
8 chr1:171666200-171682600 Weak transcription Lung lung
9 chr1:171666200-171684600 Weak transcription Fetal Stomach stomach
10 chr1:171666200-171684800 Weak transcription Thymus Thymus
11 chr1:171666600-171684800 Weak transcription Fetal Muscle Leg muscle
12 chr1:171666600-171686200 Weak transcription Gastric stomach
13 chr1:171666800-171686800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:171666800-171692000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:171666800-171692000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:171666800-171692200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:171666800-171702400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:171667000-171685000 Weak transcription Osteobl bone
19 chr1:171667000-171692000 Weak transcription Fetal Brain Female brain
20 chr1:171667000-171692200 Weak transcription Brain Anterior Caudate brain
21 chr1:171667600-171681200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:171667600-171692000 Weak transcription Fetal Lung lung
23 chr1:171667800-171688400 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr1:171667800-171688800 Weak transcription Spleen Spleen
25 chr1:171667800-171692000 Weak transcription Fetal Thymus thymus
26 chr1:171668000-171685800 Weak transcription Esophagus oesophagus
27 chr1:171668200-171680200 Strong transcription Primary monocytes fromperipheralblood blood
28 chr1:171668600-171684800 Weak transcription Fetal Kidney kidney
29 chr1:171668600-171692400 Weak transcription Brain Cingulate Gyrus brain
30 chr1:171668800-171705400 Weak transcription Right Ventricle heart
31 chr1:171668800-171708200 Weak transcription Small Intestine intestine
32 chr1:171669400-171685800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:171669600-171685800 Weak transcription NHEK skin
34 chr1:171669600-171705400 Weak transcription Fetal Brain Male brain
35 chr1:171670000-171680800 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr1:171670000-171688200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr1:171670600-171685600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:171670600-171692000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr1:171671200-171685000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:171672400-171679800 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:171672800-171685800 Weak transcription K562 blood
42 chr1:171672800-171686200 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr1:171672800-171692000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:171673600-171686800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:171674000-171696400 Weak transcription HSMM muscle
46 chr1:171674200-171686000 Weak transcription Stomach Mucosa stomach
47 chr1:171674600-171684800 Weak transcription Rectal Smooth Muscle rectum
48 chr1:171674600-171686000 Weak transcription HSMMtube muscle
49 chr1:171674600-171692200 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr1:171674800-171696800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015