The 2.0 version of rSNPBase

Variant report

Variant rs10915889
Chromosome Location chr1:226051524-226051525
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226013600-226052600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:226026800-226061600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:226030400-226052600 Weak transcription HSMMtube muscle
4 chr1:226033600-226053000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:226033800-226067400 Strong transcription H9 Cell Line embryonic stem cell
6 chr1:226034000-226056800 Strong transcription Adipose Nuclei Adipose
7 chr1:226034000-226063000 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:226034200-226062800 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr1:226036600-226064600 Weak transcription Fetal Heart heart
10 chr1:226036800-226058600 Weak transcription Brain Germinal Matrix brain
11 chr1:226036800-226066600 Weak transcription Fetal Brain Male brain
12 chr1:226037000-226054200 Weak transcription Small Intestine intestine
13 chr1:226037400-226051800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:226037600-226051800 Strong transcription Rectal Mucosa Donor 29 rectum
15 chr1:226037600-226060600 Strong transcription Placenta Placenta
16 chr1:226037800-226065200 Weak transcription Right Atrium heart
17 chr1:226038000-226052400 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:226038400-226059600 Strong transcription HUES6 Cell Line embryonic stem cell
19 chr1:226038600-226054800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:226038800-226065800 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr1:226039000-226063200 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr1:226039200-226064600 Strong transcription Skeletal Muscle Female skeletal muscle
23 chr1:226039400-226053000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:226039400-226053200 Strong transcription Thymus Thymus
25 chr1:226039600-226053800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:226039600-226059800 Strong transcription Skeletal Muscle Male skeletal muscle
27 chr1:226039600-226062200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:226039600-226063000 Strong transcription Duodenum Smooth Muscle Duodenum
29 chr1:226039800-226052000 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr1:226039800-226053800 Strong transcription Fetal Stomach stomach
31 chr1:226040400-226052000 Strong transcription Ovary ovary
32 chr1:226040400-226053400 Strong transcription Primary T helper naive cells from peripheral blood blood
33 chr1:226040600-226053000 Strong transcription Primary T helper naive cells fromperipheralblood blood
34 chr1:226040600-226053400 Strong transcription Primary T cells from cord blood blood
35 chr1:226040800-226052200 Strong transcription Primary T killer memory cells from peripheral blood blood
36 chr1:226040800-226053400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:226040800-226053400 Weak transcription HMEC breast
38 chr1:226041000-226053000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:226041000-226053000 Strong transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:226041200-226053800 Strong transcription Fetal Muscle Trunk muscle
41 chr1:226041400-226064600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:226043200-226051800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:226044200-226053400 Strong transcription Primary B cells from peripheral blood blood
44 chr1:226044400-226053400 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr1:226044400-226062800 Strong transcription Duodenum Mucosa Duodenum
46 chr1:226044600-226051800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:226044600-226052800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:226044600-226053000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:226044600-226053600 Strong transcription Primary monocytes fromperipheralblood blood
50 chr1:226044600-226056400 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015