The 2.0 version of rSNPBase

Variant report

Variant rs10916166
Chromosome Location chr1:227757068-227757069
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227752000-227757400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr1:227752000-227759800 Weak transcription Left Ventricle heart
3 chr1:227752000-227760000 Weak transcription Esophagus oesophagus
4 chr1:227752000-227766800 Weak transcription Ovary ovary
5 chr1:227752200-227758200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:227752200-227758800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:227752200-227760000 Weak transcription Fetal Intestine Large intestine
8 chr1:227752200-227763200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:227752200-227774400 Weak transcription Aorta Aorta
10 chr1:227752400-227757400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:227752400-227757600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:227752400-227757800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:227752400-227758000 Weak transcription Osteobl bone
14 chr1:227752400-227758200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:227752400-227759600 Weak transcription Primary T cells from cord blood blood
16 chr1:227752400-227759800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:227752400-227759800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:227752400-227759800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:227752400-227760000 Weak transcription Fetal Kidney kidney
20 chr1:227752400-227760000 Weak transcription Fetal Muscle Leg muscle
21 chr1:227752400-227760000 Weak transcription NHEK skin
22 chr1:227752400-227760200 Weak transcription Fetal Heart heart
23 chr1:227752400-227760200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:227752400-227763000 Weak transcription Stomach Mucosa stomach
25 chr1:227752400-227763800 Weak transcription HSMMtube muscle
26 chr1:227752400-227766800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:227752400-227780600 Weak transcription Rectal Smooth Muscle rectum
28 chr1:227752600-227757800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:227752600-227757800 Weak transcription Fetal Muscle Trunk muscle
30 chr1:227752600-227757800 Weak transcription Right Atrium heart
31 chr1:227752600-227759800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:227752600-227760000 Weak transcription Primary B cells from peripheral blood blood
33 chr1:227752600-227760000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:227752600-227760000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:227752800-227759400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:227753200-227760000 Weak transcription Small Intestine intestine
37 chr1:227753600-227763000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:227754000-227759800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:227754200-227757600 Weak transcription Fetal Intestine Small intestine
40 chr1:227754200-227760000 Weak transcription Thymus Thymus
41 chr1:227754400-227757600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:227754400-227757600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:227754400-227757800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:227754400-227757800 Weak transcription A549 lung
45 chr1:227754400-227759800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:227754400-227760000 Weak transcription Fetal Stomach stomach
47 chr1:227754400-227783600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:227755800-227757200 ZNF genes & repeats Brain Germinal Matrix brain
49 chr1:227755800-227757400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:227755800-227760000 Weak transcription HSMM muscle

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Last update: Aug 31, 2015