Variant report

Variant	rs10916317
Chromosome Location	chr1:228645063-228645064
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:248)
CpG islands
(count:61)
Chromatin interactive
region (count:44)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:248 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:228644754-228647182	GM10847	blood:	n/a	n/a
2	POLR2A	chr1:228643988-228647458	Hela-S3	cervix:	n/a	n/a
3	POLR2A	chr1:228644949-228646103	U87	brain:	n/a	n/a
4	MAX	chr1:228644745-228646632	A549	lung:	n/a	n/a
5	CTCF	chr1:228645038-228645561	K562	blood:	n/a	n/a
6	CTCF	chr1:228645045-228645496	K562	blood:	n/a	n/a
7	POLR2A	chr1:228644064-228646619	MCF10A-Er-Src	breast:	n/a	n/a
8	MAX	chr1:228645034-228645710	ECC-1	luminal epithelium:	n/a	n/a
9	ZNF384	chr1:228644869-228645785	K562	blood:	n/a	n/a
10	TAF1	chr1:228644791-228645933	K562	blood:	n/a	n/a
11	POLR2A	chr1:228644709-228647410	GM18505	blood:	n/a	n/a
12	USF1	chr1:228644976-228645415	SK-N-SH	brain:	n/a	n/a
13	MYC	chr1:228644765-228646482	K562	blood:	n/a	n/a
14	PML	chr1:228644728-228646056	K562	blood:	n/a	n/a
15	TRIM28	chr1:228644687-228645903	K562	blood:	n/a	n/a
16	JUN	chr1:228644425-228645876	K562	blood:	n/a	chr1:228644450-228644459 chr1:228645727-228645736 chr1:228645653-228645662
17	MYC	chr1:228644639-228646629	K562	blood:	n/a	n/a
18	E2F6	chr1:228645035-228646487	K562	blood:	n/a	chr1:228645651-228645660
19	MAZ	chr1:228644932-228645908	K562	blood:	n/a	n/a
20	CTCF	chr1:228644940-228645090	Caco-2	colon:	n/a	n/a
21	TAF1	chr1:228644895-228646260	H1-hESC	embryonic stem cell:	n/a	n/a
22	ELF1	chr1:228644824-228645753	K562	blood:	n/a	n/a
23	ZBTB33	chr1:228644984-228645968	HCT-116	colon:	n/a	n/a
24	TEAD4	chr1:228644628-228645979	K562	blood:	n/a	n/a
25	USF2	chr1:228644725-228645584	K562	blood:	n/a	n/a
26	CTCF	chr1:228645052-228645413	H1-hESC	embryonic stem cell:	n/a	n/a
27	GATA3	chr1:228644983-228645667	T-47D	breast:	n/a	n/a
28	MAX	chr1:228644712-228645967	K562	blood:	n/a	n/a
29	HMGN3	chr1:228644985-228645600	K562	blood:	n/a	n/a
30	POLR2A	chr1:228644642-228646523	K562	blood:	n/a	n/a
31	MAX	chr1:228644825-228646493	Hela-S3	cervix:	n/a	n/a
32	POLR2A	chr1:228644495-228647238	MCF10A-Er-Src	breast:	n/a	n/a
33	TCF3	chr1:228645045-228645638	GM12878	blood:	n/a	n/a
34	POLR2A	chr1:228644749-228646577	Hela-S3	cervix:	n/a	n/a
35	POLR2A	chr1:228644816-228646379	Hela-S3	cervix:	n/a	n/a
36	MAX	chr1:228644785-228646511	K562	blood:	n/a	n/a
37	POLR2A	chr1:228643891-228645953	K562	blood:	n/a	n/a
38	USF1	chr1:228645018-228645422	H1-hESC	embryonic stem cell:	n/a	n/a
39	ZNF263	chr1:228644824-228646416	HEK293-T-REx	kidney:	n/a	n/a
40	EP300	chr1:228644861-228645218	GM12878	blood:	n/a	n/a
41	IRF1	chr1:228644053-228646533	K562	blood:	n/a	chr1:228644336-228644353 chr1:228645651-228645660 chr1:228645551-228645563 chr1:228645551-228645568 chr1:228644543-228644550
42	STAT5A	chr1:228645016-228645983	K562	blood:	n/a	n/a
43	CEBPD	chr1:228645058-228646056	K562	blood:	n/a	n/a
44	MAFK	chr1:228644751-228645885	K562	blood:	n/a	n/a
45	UBTF	chr1:228644869-228645950	K562	blood:	n/a	n/a
46	CTCF	chr1:228645040-228645190	GM12874	blood:	n/a	n/a
47	POLR2A	chr1:228644445-228647616	H1-hESC	embryonic stem cell:	n/a	n/a
48	TBL1XR1	chr1:228644688-228645905	K562	blood:	n/a	n/a
49	SMC3	chr1:228644895-228645953	Hela-S3	cervix:	n/a	n/a
50	MYC	chr1:228644821-228646516	Hela-S3	cervix:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:228645045-228645095	GM12892	blood:	n/a
2	chr1:228645045-228645095	K562	blood:	n/a
3	chr1:228645045-228645095	ProgFib	skin:	n/a
4	chr1:228645045-228645095	T-47D	breast:	n/a
5	chr1:228645045-228645095	HRCEpiC	kidney:	n/a
6	chr1:228645045-228645095	PrEC	prostate:	n/a
7	chr1:228645045-228645095	HCT-116	colon:	n/a
8	chr1:228645045-228645095	MCF10A-Er-Src	breast:	n/a
9	chr1:228645045-228645095	A549	lung:	n/a
10	chr1:228645045-228645095	MCF-7	breast:	n/a
11	chr1:228645045-228645095	HMEC	breast:	n/a
12	chr1:228645045-228645095	AG10803	skin:	n/a
13	chr1:228645045-228645095	HIPEpiC	eye:	n/a
14	chr1:228645045-228645095	NT2-D1	testis:	n/a
15	chr1:228645045-228645095	IMR90	lung:	fetal
16	chr1:228645045-228645095	Hela-S3	cervix:	n/a
17	chr1:228645045-228645095	PFSK-1	brain:	n/a
18	chr1:228645045-228645095	NHDF-neo	bronchial:	n/a
19	chr1:228645045-228645095	GM12878	blood:	n/a
20	chr1:228645045-228645095	SAEC	small airway:	n/a
21	chr1:228645045-228645095	HL-60	blood:	n/a
22	chr1:228645045-228645095	HCM	heart:	n/a
23	chr1:228645045-228645095	AG04450	lung:	fetal
24	chr1:228645045-228645095	HCF	heart:	n/a
25	chr1:228645045-228645095	Jurkat	blood:	n/a
26	chr1:228645045-228645095	RPTEC	kidney:	n/a
27	chr1:228645045-228645095	ovcar-3	ovarian:	n/a
28	chr1:228645045-228645095	HAEpiC	amniotic membrane:	n/a
29	chr1:228645045-228645095	NHBE	bronchial:	n/a
30	chr1:228645045-228645095	AoSMC	blood vessel:	n/a
31	chr1:228645045-228645095	BJ	skin:	n/a
32	chr1:228645045-228645095	CMK	blood:	n/a
33	chr1:228645045-228645095	SK-N-SH_RA	brain:	n/a
34	chr1:228645045-228645095	NH-A	brain:	n/a
35	chr1:228645045-228645095	SK-N-MC	brain:	n/a
36	chr1:228645045-228645095	GM12891	blood:	n/a
37	chr1:228645045-228645095	Caco-2	colon:	n/a
38	chr1:228645045-228645095	AG04449	skin:	fetal
39	chr1:228645045-228645095	HEEpiC	esophagus:	n/a
40	chr1:228645045-228645095	AG09309	skin:	n/a
41	chr1:228645045-228645095	HNPCEpiC	eye:	n/a
42	chr1:228645045-228645095	LNCaP	prostate:	n/a
43	chr1:228645045-228645095	HRPEpiC	eye:	n/a
44	chr1:228645045-228645095	SKMC	muscle:	n/a
45	chr1:228645045-228645095	SK-N-SH	brain:	n/a
46	chr1:228645045-228645095	U87	brain:	n/a
47	chr1:228645045-228645095	PANC-1	pancreas:	n/a
48	chr1:228645045-228645095	Hepatocyte	liver:	n/a
49	chr1:228645045-228645095	BE2_C	brain:	n/a
50	chr1:228645045-228645095	ECC-1	luminal epithelium:	n/a

(count:44 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:228644987..228645824-chr5:133561682..133562310,2	Hela-S3	cervix:
2	chr1:228643230..228649256-chr1:228671672..228678578,15	MCF-7	breast:
3	chr1:228643588..228645141-chr12:57117771..57120124,2	K562	blood:
4	chr1:228638761..228647671-chr1:228695176..228704605,18	K562	blood:
5	chr1:228644193..228646500-chr17:56735142..56738060,2	MCF-7	breast:
6	chr1:228589639..228603795-chr1:228638211..228648676,43	MCF-7	breast:
7	chr1:228400987..228403639-chr1:228644070..228647036,3	K562	blood:
8	chr1:228361423..228364297-chr1:228644461..228646940,2	K562	blood:
9	chr1:228356236..228360236-chr1:228642827..228646319,4	K562	blood:
10	chr1:228635196..228636992-chr1:228643144..228645156,2	MCF-7	breast:
11	chr1:228527319..228529174-chr1:228643388..228645419,2	K562	blood:
12	chr1:228579742..228582257-chr1:228643966..228647332,3	MCF-7	breast:
13	chr1:228576966..228583255-chr1:228642395..228646960,7	MCF-7	breast:
14	chr1:228585219..228604537-chr1:228641966..228650471,45	MCF-7	breast:
15	chr1:228644894..228645394-chr17:1619103..1619604,2	Hela-S3	cervix:
16	chr1:228540373..228544490-chr1:228644881..228647395,4	MCF-7	breast:
17	chr1:228540366..228544195-chr1:228644232..228647722,5	K562	blood:
18	chr1:228399724..228401498-chr1:228644939..228647172,2	MCF-7	breast:
19	chr1:228327365..228329534-chr1:228645028..228646794,2	MCF-7	breast:
20	chr1:228645024..228645683-chr11:118965656..118966271,2	HCT-116	colon:
21	chr1:228326283..228328223-chr1:228644101..228647229,3	K562	blood:
22	chr1:228487421..228490284-chr1:228642945..228645518,2	K562	blood:
23	chr1:228644136..228646593-chr1:229642756..229644916,2	K562	blood:
24	chr1:228572036..228574709-chr1:228642846..228645272,2	K562	blood:
25	chr1:228461911..228467066-chr1:228644143..228647181,7	K562	blood:
26	chr1:228644994..228645869-chr15:89877756..89878480,3	Hela-S3	cervix:
27	chr1:228644646..228645557-chr5:107717595..107718411,2	Hela-S3	cervix:
28	chr1:228645021..228646792-chr1:228786482..228788806,2	K562	blood:
29	chr1:228352175..228354992-chr1:228642370..228645679,3	K562	blood:
30	chr1:226111842..226114398-chr1:228644051..228646541,2	K562	blood:
31	chr1:228357413..228360288-chr1:228642904..228645646,2	K562	blood:
32	chr1:228269292..228271024-chr1:228643891..228647144,3	K562	blood:
33	chr1:228351867..228354707-chr1:228644066..228646838,3	K562	blood:
34	chr1:228290061..228293195-chr1:228643504..228645569,3	K562	blood:
35	chr1:228271974..228275319-chr1:228643789..228645457,3	K562	blood:
36	chr1:228643550..228646999-chr1:228697754..228701028,5	K562	blood:
37	chr1:228272480..228275319-chr1:228642509..228645344,2	K562	blood:
38	chr1:228644058..228645584-chr20:49575003..49577422,2	MCF-7	breast:
39	chr1:228270437..228272083-chr1:228644163..228645827,2	MCF-7	breast:
40	chr1:228642342..228647806-chr1:228672380..228678428,13	MCF-7	breast:
41	chr1:228326723..228329419-chr1:228644101..228647035,3	K562	blood:
42	chr1:228461911..228467066-chr1:228644125..228647181,7	K562	blood:
43	chr1:228479719..228482312-chr1:228644744..228646634,2	K562	blood:
44	chr1:228327593..228329181-chr1:228644179..228646860,2	MCF-7	breast:

No data

Variant related genes	Relation type
HIST3H2BB	TF binding region
MIR4666A	TF binding region
MIR4666A	CpG island
HIST3H2BB	CpG island
ENSG00000154358	Chromatin interaction
ENSG00000231563	Chromatin interaction
ENSG00000270104	Chromatin interaction
ENSG00000069248	Chromatin interaction
ENSG00000143811	Chromatin interaction
ENSG00000162931	Chromatin interaction
ENSG00000196531	Chromatin interaction
ENSG00000270177	Chromatin interaction
ENSG00000269890	Chromatin interaction
ENSG00000261441	Chromatin interaction
ENSG00000145743	Chromatin interaction
ENSG00000215811	Chromatin interaction
ENSG00000143793	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000140521	Chromatin interaction
ENSG00000272772	Chromatin interaction
ENSG00000124217	Chromatin interaction
ENSG00000000419	Chromatin interaction
ENSG00000206878	Chromatin interaction
ENSG00000143774	Chromatin interaction
ENSG00000269934	Chromatin interaction
ENSG00000186594	Chromatin interaction
ENSG00000143761	Chromatin interaction
ENSG00000168159	Chromatin interaction
ENSG00000188486	Chromatin interaction
ENSG00000181873	Chromatin interaction
ENSG00000113575	Chromatin interaction
ENSG00000223635	Chromatin interaction
ENSG00000203684	Chromatin interaction
ENSG00000162913	Chromatin interaction
ENSG00000270094	Chromatin interaction
ENSG00000154370	Chromatin interaction

Extended variants
information (count: 53 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1007686	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10916313	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs10916314	0.87[CEU][hapmap];0.90[EUR][1000 genomes]
rs1150918	0.84[GIH][hapmap];0.83[MKK][hapmap];1.00[YRI][hapmap]
rs11581974	0.84[GIH][hapmap]
rs11587839	0.95[EUR][1000 genomes]
rs1188473	0.84[GIH][hapmap];0.83[MKK][hapmap];1.00[YRI][hapmap]
rs1188482	0.89[GIH][hapmap]
rs1188483	0.89[GIH][hapmap]
rs1188487	0.89[GIH][hapmap]
rs12094956	0.84[GIH][hapmap];1.00[YRI][hapmap]
rs12131962	0.90[EUR][1000 genomes]
rs12542	0.85[CEU][hapmap]
rs12691493	0.84[GIH][hapmap];1.00[YRI][hapmap]
rs12725863	0.97[EUR][1000 genomes]
rs12735877	1.00[YRI][hapmap]
rs12746910	0.81[EUR][1000 genomes]
rs13373984	0.84[GIH][hapmap];1.00[YRI][hapmap]
rs1886774	0.89[EUR][1000 genomes]
rs1925714	0.85[CEU][hapmap]
rs1925730	0.85[CEU][hapmap]
rs2147959	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2230656	0.84[GIH][hapmap]
rs4653551	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs4653552	0.96[EUR][1000 genomes]
rs4653960	0.96[EUR][1000 genomes]
rs474600	0.84[GIH][hapmap]
rs503391	0.84[GIH][hapmap]
rs513467	0.84[GIH][hapmap]
rs532465	0.84[GIH][hapmap]
rs564309	0.84[GIH][hapmap]
rs6426503	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6659690	0.96[EUR][1000 genomes]
rs6666241	0.96[EUR][1000 genomes]
rs7524236	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes]
rs7529055	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7533319	0.83[ASN][1000 genomes]
rs7555298	0.87[CEU][hapmap];0.82[TSI][hapmap];0.90[EUR][1000 genomes]
rs7555386	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv32853	chr1:227880116-228806209	Enhancers Genic enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	187 gene(s)	inside rSNPs	diseases
2	nsv826908	chr1:227895386-228691100	Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
3	nsv523935	chr1:228038124-228681749	Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	137 gene(s)	inside rSNPs	diseases
4	nsv873255	chr1:228254753-228684779	Genic enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	133 gene(s)	inside rSNPs	diseases
5	nsv827019	chr1:228314167-228651020	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	106 gene(s)	inside rSNPs	diseases
6	nsv873270	chr1:228442663-228699477	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
7	nsv1009891	chr1:228450763-228742676	Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
8	nsv517545	chr1:228456147-228685999	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
9	nsv1013500	chr1:228459134-228849601	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
10	nsv873279	chr1:228494790-228681195	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
11	nsv873281	chr1:228505739-228656780	Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
12	esv1808261	chr1:228509427-228674518	Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
13	esv2829948	chr1:228509427-228687948	Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
14	nsv549296	chr1:228585837-228720480	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	64 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs10916317	WDR26	cis	cerebellum	SCAN
rs10916317	DUSP5P	cis	cerebellum	SCAN

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:228643000-228647800	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr1:228643000-228648200	Active TSS	iPS-20b Cell Line	embryonic stem cell
3	chr1:228643200-228647600	Active TSS	iPS-15b Cell Line	embryonic stem cell
4	chr1:228643200-228647600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:228643200-228647800	Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr1:228643200-228647800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
7	chr1:228643200-228647800	Active TSS	A549	lung
8	chr1:228643400-228646000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr1:228643400-228646000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr1:228643400-228647200	Active TSS	Hela-S3	cervix
11	chr1:228643400-228647400	Active TSS	HUES64 Cell Line	embryonic stem cell
12	chr1:228643400-228647400	Active TSS	Brain Inferior Temporal Lobe	brain
13	chr1:228643400-228647400	Active TSS	GM12878-XiMat	blood
14	chr1:228643400-228647600	Active TSS	H9 Cell Line	embryonic stem cell
15	chr1:228643400-228647800	Active TSS	ES-I3 Cell Line	embryonic stem cell
16	chr1:228643400-228647800	Active TSS	H1 Cell Line	embryonic stem cell
17	chr1:228643400-228647800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr1:228643600-228645600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr1:228643600-228647000	Active TSS	Brain Angular Gyrus	brain
20	chr1:228643800-228646800	Active TSS	Fetal Intestine Small	intestine
21	chr1:228643800-228647200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr1:228643800-228647200	Active TSS	K562	blood
23	chr1:228643800-228647400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr1:228644000-228645200	Flanking Active TSS	HUVEC	blood vessel
25	chr1:228644000-228645200	Flanking Active TSS	NH-A	brain
26	chr1:228644000-228647000	Active TSS	Brain Cingulate Gyrus	brain
27	chr1:228644200-228645200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
28	chr1:228644200-228645800	Active TSS	Duodenum Mucosa	Duodenum
29	chr1:228644200-228646200	Active TSS	Fetal Intestine Large	intestine
30	chr1:228644200-228646200	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
31	chr1:228644200-228646800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr1:228644200-228646800	Active TSS	Brain Anterior Caudate	brain
33	chr1:228644200-228647200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
34	chr1:228644200-228647400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
35	chr1:228644200-228647600	Active TSS	Fetal Kidney	kidney
36	chr1:228644400-228645200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
37	chr1:228644400-228645800	Active TSS	HMEC	breast
38	chr1:228644400-228646000	Active TSS	Pancreatic Islets	Pancreatic Islet
39	chr1:228644400-228646200	Active TSS	Fetal Brain Male	brain
40	chr1:228644400-228646200	Active TSS	Fetal Stomach	stomach
41	chr1:228644400-228646400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr1:228644400-228646800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr1:228644400-228646800	Active TSS	NHLF	lung
44	chr1:228644400-228647200	Active TSS	Fetal Brain Female	brain
45	chr1:228644400-228647200	Active TSS	NHEK	skin
46	chr1:228644400-228647400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr1:228644400-228647400	Active TSS	iPS-18 Cell Line	embryonic stem cell
48	chr1:228644400-228647400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr1:228644400-228647400	Active TSS	Osteobl	bone
50	chr1:228644600-228645200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell

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