The 2.0 version of rSNPBase

Variant report

Variant rs10921202
Chromosome Location chr1:192547052-192547053
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:192537200-192548400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:192543000-192547800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:192543200-192548400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr1:192543200-192548400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:192543400-192548200 Weak transcription HSMMtube muscle
6 chr1:192543400-192548400 Weak transcription HSMM muscle
7 chr1:192543600-192547400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:192543600-192548600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:192543800-192547800 Weak transcription Muscle Satellite Cultured Cells --
10 chr1:192544000-192548200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:192544600-192547400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:192544600-192548800 Active TSS Duodenum Mucosa Duodenum
13 chr1:192544800-192547400 Active TSS Colon Smooth Muscle Colon
14 chr1:192544800-192548400 Weak transcription NHLF lung
15 chr1:192544800-192549000 Active TSS Rectal Mucosa Donor 29 rectum
16 chr1:192544800-192549000 Active TSS Rectal Smooth Muscle rectum
17 chr1:192544800-192550200 Active TSS Duodenum Smooth Muscle Duodenum
18 chr1:192545000-192547600 Active TSS Fetal Intestine Large intestine
19 chr1:192545000-192547800 Active TSS Primary T cells fromperipheralblood blood
20 chr1:192545000-192548000 Active TSS Rectal Mucosa Donor 31 rectum
21 chr1:192545000-192548600 Active TSS Brain Hippocampus Middle brain
22 chr1:192545000-192548600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:192545000-192548800 Active TSS Fetal Stomach stomach
24 chr1:192545000-192548800 Active TSS Thymus Thymus
25 chr1:192545000-192549000 Flanking Active TSS Primary T cells from cord blood blood
26 chr1:192545200-192548000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:192545200-192548000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr1:192545200-192548200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
29 chr1:192545200-192548400 Active TSS GM12878-XiMat blood
30 chr1:192545200-192548800 Weak transcription Fetal Thymus thymus
31 chr1:192545200-192550400 Transcr. at gene 5' and 3' Dnd41 blood
32 chr1:192545400-192548400 Active TSS Stomach Smooth Muscle stomach
33 chr1:192545600-192547200 Active TSS Liver Liver
34 chr1:192545800-192548000 Active TSS Primary T helper cells PMA-I stimulated --
35 chr1:192546000-192548600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:192546000-192549600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:192546200-192548800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:192546400-192548800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
39 chr1:192546600-192547200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
40 chr1:192546800-192547200 Active TSS Primary T helper naive cells from peripheral blood blood
41 chr1:192547000-192547200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
42 chr1:192547000-192547600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr1:192547000-192547800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:192547000-192548600 Enhancers HUES64 Cell Line embryonic stem cell
45 chr1:192547000-192548800 Enhancers Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015