Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11677862	0.82[ASN][1000 genomes]
rs11883925	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11885117	0.85[AMR][1000 genomes]
rs11901460	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12104934	0.84[ASN][1000 genomes]
rs12104943	0.82[ASN][1000 genomes]
rs12613881	0.81[ASN][1000 genomes]
rs12615504	0.81[ASN][1000 genomes]
rs12615512	0.81[ASN][1000 genomes]
rs12617300	0.80[ASN][1000 genomes]
rs12619090	0.81[ASN][1000 genomes]
rs12622086	0.82[ASN][1000 genomes]
rs12693367	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12988863	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13001696	0.80[ASN][1000 genomes]
rs4335910	0.81[ASN][1000 genomes]
rs4396672	0.81[ASN][1000 genomes]
rs4556942	0.81[ASN][1000 genomes]
rs4564742	0.81[ASN][1000 genomes]
rs4583423	0.80[ASN][1000 genomes]
rs4595929	0.80[ASN][1000 genomes]
rs4666648	0.81[ASN][1000 genomes]
rs4666955	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55921900	0.81[ASN][1000 genomes]
rs59285257	0.81[ASN][1000 genomes]
rs59641790	0.81[ASN][1000 genomes]
rs6742505	0.81[ASN][1000 genomes]
rs6760489	0.83[ASN][1000 genomes]
rs7591437	0.81[ASN][1000 genomes]
rs7597877	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002074	chr2:184697897-184955330	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv875487	chr2:184737282-185186670	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv997475	chr2:184828307-184993186	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv583991	chr2:184855828-184954425	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184883800-184911600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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