Variant report
Variant | rs10938761 |
---|---|
Chromosome Location | chr4:10342723-10342724 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
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No data |
No data |
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rs_ID | r2[population] |
---|---|
rs1001218 | 0.84[JPT][hapmap] |
rs10017447 | 0.83[CHB][hapmap] |
rs10020720 | 0.82[JPT][hapmap];0.87[YRI][hapmap] |
rs10023177 | 0.85[JPT][hapmap] |
rs10027448 | 0.80[JPT][hapmap];0.83[YRI][hapmap] |
rs10031699 | 0.84[JPT][hapmap] |
rs10031806 | 0.81[ASN][1000 genomes] |
rs10033128 | 0.81[YRI][hapmap] |
rs1017123 | 0.84[EUR][1000 genomes] |
rs1035051 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs1035052 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10489067 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10489075 | 0.81[GIH][hapmap];0.88[MEX][hapmap] |
rs10489077 | 0.85[JPT][hapmap];0.94[MEX][hapmap] |
rs10939762 | 0.84[JPT][hapmap] |
rs10939820 | 0.81[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs11724141 | 0.84[JPT][hapmap];1.00[YRI][hapmap] |
rs11724536 | 0.81[ASW][hapmap];1.00[GIH][hapmap];0.89[JPT][hapmap];1.00[MEX][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes] |
rs11724641 | 0.85[JPT][hapmap] |
rs11727261 | 0.87[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11727366 | 0.86[JPT][hapmap] |
rs11728574 | 0.85[JPT][hapmap] |
rs11931317 | 0.83[ASN][1000 genomes] |
rs11947517 | 0.82[CHB][hapmap] |
rs12505722 | 0.85[JPT][hapmap] |
rs12506560 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12506625 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12509659 | 0.88[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs12511548 | 0.85[JPT][hapmap] |
rs12640013 | 0.94[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs13114042 | 0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs13120791 | 0.85[JPT][hapmap] |
rs13122923 | 0.84[EUR][1000 genomes] |
rs13125564 | 0.85[JPT][hapmap];0.81[EUR][1000 genomes] |
rs13126279 | 0.84[EUR][1000 genomes] |
rs13126688 | 0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs13134376 | 0.83[EUR][1000 genomes] |
rs13134726 | 0.81[GIH][hapmap];0.85[JPT][hapmap];0.94[MEX][hapmap];0.86[EUR][1000 genomes] |
rs13141446 | 0.84[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs13142123 | 0.81[EUR][1000 genomes] |
rs13148836 | 0.80[JPT][hapmap] |
rs13150639 | 0.86[EUR][1000 genomes] |
rs1541522 | 0.85[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.83[YRI][hapmap];0.82[AFR][1000 genomes] |
rs16895915 | 0.88[AFR][1000 genomes] |
rs16897170 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs1860904 | 0.82[ASN][1000 genomes] |
rs1860906 | 0.96[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs1860909 | 0.92[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs1860912 | 0.85[JPT][hapmap];0.94[MEX][hapmap] |
rs1990472 | 0.92[AFR][1000 genomes] |
rs1990473 | 0.92[AFR][1000 genomes] |
rs2003566 | 0.83[AFR][1000 genomes] |
rs2007103 | 0.81[ASN][1000 genomes] |
rs2024276 | 0.89[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs2024278 | 1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs2024283 | 0.81[YRI][hapmap] |
rs2080076 | 0.85[JPT][hapmap] |
rs2098234 | 0.84[JPT][hapmap] |
rs2098235 | 0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2110022 | 0.81[YRI][hapmap] |
rs2110028 | 0.85[JPT][hapmap] |
rs2159866 | 1.00[YRI][hapmap] |
rs2192083 | 0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs2192090 | 0.81[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs2192092 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2192097 | 0.81[ASW][hapmap];0.81[GIH][hapmap];0.85[JPT][hapmap];0.83[LWK][hapmap];0.88[MEX][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes] |
rs2192100 | 0.81[ASW][hapmap];0.81[GIH][hapmap];0.85[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.93[MKK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs2192101 | 0.83[CHB][hapmap] |
rs2215687 | 0.85[JPT][hapmap] |
rs2215693 | 0.85[JPT][hapmap] |
rs2241465 | 0.85[LWK][hapmap] |
rs2241466 | 0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs28551768 | 0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2868419 | 0.80[JPT][hapmap];0.83[YRI][hapmap] |
rs2868940 | 0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2869214 | 0.85[JPT][hapmap] |
rs34103396 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs35921455 | 0.82[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs4140695 | 0.83[GIH][hapmap];0.85[JPT][hapmap];0.85[LWK][hapmap];0.88[MEX][hapmap] |
rs4235358 | 0.81[ASW][hapmap];0.85[JPT][hapmap];0.85[LWK][hapmap];0.81[MEX][hapmap] |
rs4306950 | 0.81[ASN][1000 genomes] |
rs4364255 | 0.92[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs4406017 | 0.85[JPT][hapmap];0.81[AFR][1000 genomes];0.84[EUR][1000 genomes] |
rs4443281 | 0.81[YRI][hapmap] |
rs4463062 | 0.83[CHD][hapmap] |
rs4610325 | 0.89[YRI][hapmap] |
rs4626195 | 0.96[AFR][1000 genomes];0.85[EUR][1000 genomes] |
rs4697718 | 0.85[JPT][hapmap] |
rs4697719 | 0.85[JPT][hapmap] |
rs4697721 | 0.84[JPT][hapmap] |
rs4697723 | 0.81[ASW][hapmap];0.81[GIH][hapmap];0.85[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.83[YRI][hapmap] |
rs4697725 | 0.85[JPT][hapmap];0.82[YRI][hapmap] |
rs4697733 | 0.80[JPT][hapmap] |
rs4697734 | 0.85[JPT][hapmap];0.94[MEX][hapmap] |
rs4697736 | 0.81[GIH][hapmap];0.85[JPT][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap] |
rs4697737 | 0.85[JPT][hapmap] |
rs4697738 | 0.90[AFR][1000 genomes] |
rs4697740 | 1.00[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs4697741 | 0.94[AFR][1000 genomes] |
rs4697746 | 0.98[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs4697750 | 0.83[CHB][hapmap] |
rs4697751 | 0.83[CHB][hapmap] |
rs4697942 | 0.81[ASW][hapmap];0.81[GIH][hapmap];0.85[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.83[YRI][hapmap] |
rs4697943 | 0.85[JPT][hapmap];0.81[MEX][hapmap] |
rs4697944 | 0.81[GIH][hapmap];0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs4697945 | 0.81[GIH][hapmap];0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs4697952 | 0.85[JPT][hapmap] |
rs4697953 | 0.90[ASW][hapmap];0.81[GIH][hapmap];0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs4697954 | 0.85[JPT][hapmap] |
rs4697955 | 0.80[YRI][hapmap] |
rs4697959 | 0.85[JPT][hapmap];0.83[YRI][hapmap] |
rs4697960 | 0.82[CHB][hapmap] |
rs4697966 | 0.82[CHB][hapmap];0.82[CHD][hapmap] |
rs4697970 | 0.81[GIH][hapmap];0.80[JPT][hapmap] |
rs4697976 | 0.81[GIH][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];0.83[YRI][hapmap] |
rs4697985 | 0.85[JPT][hapmap];0.94[MEX][hapmap] |
rs4697986 | 0.86[CHB][hapmap] |
rs4697987 | 0.85[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes] |
rs4697988 | 0.81[JPT][hapmap] |
rs4697990 | 0.85[JPT][hapmap];0.94[MEX][hapmap] |
rs4697992 | 0.86[EUR][1000 genomes] |
rs4697995 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs4697997 | 0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs4698005 | 0.81[AFR][1000 genomes] |
rs4698008 | 0.96[AFR][1000 genomes] |
rs4698016 | 0.94[AFR][1000 genomes] |
rs4698021 | 0.98[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs4698024 | 0.98[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs4698025 | 0.82[CHB][hapmap] |
rs4698026 | 0.98[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs4698035 | 0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs4698038 | 0.90[YRI][hapmap] |
rs4698039 | 0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs4698042 | 0.90[ASN][1000 genomes] |
rs4698045 | 0.85[JPT][hapmap];0.94[LWK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs4698049 | 0.82[CHD][hapmap] |
rs6447934 | 0.88[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs6449341 | 0.84[JPT][hapmap];0.82[YRI][hapmap] |
rs6449395 | 0.84[EUR][1000 genomes] |
rs6449414 | 0.85[JPT][hapmap] |
rs6449418 | 0.83[LWK][hapmap];0.90[YRI][hapmap] |
rs6449419 | 0.90[YRI][hapmap] |
rs6449423 | 0.91[YRI][hapmap];0.92[AFR][1000 genomes] |
rs6449440 | 0.92[AFR][1000 genomes] |
rs6449450 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs6810792 | 0.88[AFR][1000 genomes] |
rs6813919 | 0.92[AFR][1000 genomes];0.84[EUR][1000 genomes] |
rs6814538 | 0.90[YRI][hapmap] |
rs6816102 | 0.90[YRI][hapmap];0.86[AFR][1000 genomes] |
rs6820118 | 0.81[YRI][hapmap] |
rs6834620 | 0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6839344 | 0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs6840194 | 0.96[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs6850167 | 0.85[JPT][hapmap] |
rs6854212 | 1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes] |
rs6854794 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs71603998 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7441343 | 0.81[ASN][1000 genomes] |
rs759022 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs759028 | 0.90[YRI][hapmap] |
rs759032 | 0.85[JPT][hapmap] |
rs7654258 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs7661365 | 0.88[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs7670692 | 0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs7677318 | 0.91[ASW][hapmap];0.85[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];0.93[MKK][hapmap];0.81[TSI][hapmap];0.91[YRI][hapmap];0.85[AFR][1000 genomes] |
rs7680825 | 0.81[ASN][1000 genomes] |
rs7688808 | 0.85[JPT][hapmap];0.88[MEX][hapmap] |
rs7691156 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs874079 | 0.85[JPT][hapmap] |
rs887726 | 0.85[JPT][hapmap] |
rs887727 | 0.82[CHB][hapmap] |
rs917827 | 0.80[JPT][hapmap] |
rs9291406 | 0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs978465 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs978466 | 0.81[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs9990427 | 0.81[ASW][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes] |
rs9995792 | 0.85[AFR][1000 genomes];0.91[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv878681 | chr4:9802853-10397327 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 51 gene(s) | inside rSNPs | diseases |
2 | nsv997941 | chr4:9805223-10493388 | Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 54 gene(s) | inside rSNPs | diseases |
3 | nsv1008649 | chr4:9805223-10589802 | Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
4 | nsv1000587 | chr4:9805223-10610752 | Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
5 | nsv537022 | chr4:9805223-10610752 | Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
6 | nsv1003454 | chr4:9805223-10710990 | Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
7 | nsv537023 | chr4:9805223-10710990 | Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
8 | nsv1004801 | chr4:9814720-10674528 | Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
9 | nsv537024 | chr4:9814720-10674528 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
10 | nsv931483 | chr4:9814721-10716463 | Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
11 | nsv1009972 | chr4:9903566-10710990 | Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
12 | nsv537027 | chr4:9903566-10710990 | Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
13 | nsv1010620 | chr4:9937123-10686682 | Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
14 | nsv530280 | chr4:9947818-10940041 | Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 66 gene(s) | inside rSNPs | diseases |
15 | nsv532706 | chr4:9948018-10451450 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
16 | nsv878691 | chr4:9966477-10418078 | Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
17 | nsv869057 | chr4:10013411-10875454 | Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 65 gene(s) | inside rSNPs | diseases |
18 | nsv997936 | chr4:10040713-11009045 | Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 65 gene(s) | inside rSNPs | diseases |
19 | nsv593695 | chr4:10138470-10345548 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
20 | nsv1000177 | chr4:10212245-10557776 | Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
21 | nsv537037 | chr4:10212245-10557776 | Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
22 | nsv1007206 | chr4:10229982-10362490 | Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
23 | nsv829858 | chr4:10300236-10492716 | Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
24 | esv3409821 | chr4:10342254-10345652 | Weak transcription Enhancers | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:10337400-10343000 | Weak transcription | K562 | blood |
2 | chr4:10338800-10346800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
3 | chr4:10339200-10346800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
4 | chr4:10339400-10346800 | Weak transcription | NHEK | skin |
5 | chr4:10339800-10345400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
6 | chr4:10340000-10346400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |