The 2.0 version of rSNPBase

Variant report

Variant rs10942263
Chromosome Location chr5:80703891-80703892
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80693400-80721600 Weak transcription Fetal Brain Male brain
2 chr5:80693600-80704000 Weak transcription NHLF lung
3 chr5:80693800-80714600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr5:80694000-80704400 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr5:80694800-80707800 Weak transcription Dnd41 blood
6 chr5:80694800-80722400 Weak transcription Aorta Aorta
7 chr5:80695400-80716000 Weak transcription Brain Angular Gyrus brain
8 chr5:80697200-80739600 Weak transcription Left Ventricle heart
9 chr5:80697400-80716000 Weak transcription Fetal Muscle Trunk muscle
10 chr5:80698200-80716000 Weak transcription Thymus Thymus
11 chr5:80698400-80704200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:80698600-80705000 Weak transcription Fetal Intestine Large intestine
13 chr5:80700200-80715000 Weak transcription Primary T cells fromperipheralblood blood
14 chr5:80700400-80712400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr5:80701200-80704000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr5:80701400-80704400 Weak transcription Fetal Kidney kidney
17 chr5:80701600-80715800 Weak transcription Brain Anterior Caudate brain
18 chr5:80701600-80715800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr5:80701800-80722000 Weak transcription Ovary ovary
20 chr5:80702000-80716000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr5:80702200-80733600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr5:80702400-80715800 Weak transcription Stomach Smooth Muscle stomach
23 chr5:80703000-80704600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr5:80703000-80705600 Strong transcription Fetal Thymus thymus
25 chr5:80703000-80705800 Strong transcription Primary T cells from cord blood blood
26 chr5:80703000-80706000 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr5:80703200-80704800 Strong transcription Primary hematopoietic stem cells blood
28 chr5:80703200-80714000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:80703200-80714000 Weak transcription Primary B cells from peripheral blood blood
30 chr5:80703200-80779200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr5:80703400-80704000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr5:80703400-80716000 Weak transcription Fetal Brain Female brain
33 chr5:80703600-80704200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr5:80703600-80706000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:80703600-80706600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr5:80703800-80704400 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr5:80703800-80705600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr5:80703800-80705800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr5:80703800-80706000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015