Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10817135	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10817160	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10980622	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10980777	0.86[AMR][1000 genomes]
rs10980809	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11787964	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11794654	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13283681	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13290939	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13292867	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13295383	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13297375	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13299950	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13301185	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13302714	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2001382	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34533733	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4545208	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4573384	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4645657	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7032933	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831662	chr9:99752521-99939231	Bivalent Enhancer Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:99850600-99877000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr9:99856600-99871400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr9:99866600-99867600	Weak transcription	HSMMtube	muscle

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