Variant report

Variant	rs10984709
Chromosome Location	chr9:100761397-100761398
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:100683227..100687367-chr9:100758311..100762778,5	K562	blood:

Variant related genes	Relation type
ENSG00000136932	Chromatin interaction

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2540773	chr9:100760463-100762115	Strong transcription Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv7209	chr9:100760880-100761657	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3406189	chr9:100760953-100761468	Strong transcription Genic enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3485687	chr9:100760979-100761480	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3485688	chr9:100760987-100761446	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv3485692	chr9:100760987-100761477	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3485690	chr9:100760998-100761425	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	esv3485691	chr9:100761004-100761442	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv3482567	chr9:100761009-100761459	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv3482565	chr9:100761020-100761416	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv3482568	chr9:100761021-100761462	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	esv3387037	chr9:100761024-100761412	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	esv3485689	chr9:100761031-100761437	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	esv4458	chr9:100761035-100761516	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	esv3485693	chr9:100761052-100761413	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	esv3482569	chr9:100761059-100761406	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	esv3485694	chr9:100761059-100761406	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	esv1721459	chr9:100761075-100761405	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100748000-100767200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr9:100748400-100761600	Weak transcription	Brain Anterior Caudate	brain
3	chr9:100749200-100767200	Weak transcription	Esophagus	oesophagus
4	chr9:100750000-100767200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr9:100750000-100767400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr9:100750800-100764000	Weak transcription	Fetal Brain Female	brain
7	chr9:100751000-100761800	Weak transcription	Right Atrium	heart
8	chr9:100751000-100764200	Weak transcription	Fetal Brain Male	brain
9	chr9:100751000-100765200	Weak transcription	Aorta	Aorta
10	chr9:100752000-100784000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:100753000-100761600	Weak transcription	HSMMtube	muscle
12	chr9:100753000-100767800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr9:100753000-100768400	Weak transcription	Fetal Heart	heart
14	chr9:100753000-100769000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr9:100753400-100767200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr9:100753600-100767200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr9:100754600-100784200	Strong transcription	Dnd41	blood
18	chr9:100754600-100784400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr9:100755200-100782200	Strong transcription	HepG2	liver
20	chr9:100755200-100783800	Strong transcription	NHEK	skin
21	chr9:100755400-100763800	Weak transcription	Gastric	stomach
22	chr9:100755400-100783000	Weak transcription	Stomach Mucosa	stomach
23	chr9:100755600-100769200	Weak transcription	Pancreatic Islets	Pancreatic Islet
24	chr9:100755600-100784400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr9:100755800-100761400	Weak transcription	Brain Cingulate Gyrus	brain
26	chr9:100755800-100782200	Strong transcription	K562	blood
27	chr9:100756000-100777800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr9:100756200-100761600	Weak transcription	Ovary	ovary
29	chr9:100756200-100767200	Weak transcription	Colonic Mucosa	Colon
30	chr9:100756400-100763000	Strong transcription	HUES6 Cell Line	embryonic stem cell
31	chr9:100756400-100767200	Weak transcription	Spleen	Spleen
32	chr9:100756400-100772600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr9:100756400-100783600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr9:100756400-100783800	Strong transcription	Fetal Muscle Trunk	muscle
35	chr9:100756400-100784400	Strong transcription	Fetal Thymus	thymus
36	chr9:100756600-100761600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
37	chr9:100756600-100762400	Weak transcription	Small Intestine	intestine
38	chr9:100756600-100763000	Strong transcription	Hela-S3	cervix
39	chr9:100756600-100767600	Weak transcription	Brain Germinal Matrix	brain
40	chr9:100756600-100785600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
41	chr9:100756800-100765600	Strong transcription	Fetal Muscle Leg	muscle
42	chr9:100756800-100771600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr9:100756800-100771800	Strong transcription	Monocytes-CD14+_RO01746	blood
44	chr9:100756800-100781200	Strong transcription	HUES64 Cell Line	embryonic stem cell
45	chr9:100756800-100783000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr9:100756800-100783400	Strong transcription	HMEC	breast
47	chr9:100757000-100762600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr9:100757000-100762600	Strong transcription	NH-A	brain
49	chr9:100757000-100762800	Strong transcription	HUES48 Cell Line	embryonic stem cell
50	chr9:100757000-100762800	Strong transcription	iPS-20b Cell Line	embryonic stem cell

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